Pairwise Alignments

Query, 795 a.a., DNA polymerase II (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N1B4

Subject, 783 a.a., DNA polymerase II (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 530/784 (67%), Positives = 629/784 (80%), Gaps = 4/784 (0%)

Query: 13  QQGFVLTRHWRDTPAGTEVEFWLATDAGPRRVRLPHQPSVAFIPAAQREQAEGMLHGEKN 72
           Q GF+LTRHWRDTP GTEV FWLATD GP +  L  Q SVAFIP +Q  +A  +L  EK+
Sbjct: 3   QAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQTSRAASLLQAEKD 62

Query: 73  VELKPLALLDFEHRPVLGLYCQQHGQLMRLETALRRSSVDVFEADVRPPERYMMERFITA 132
             L PL L DF  +PV GLYC+ H QLMR+E  LR + V V+EADVRPPERY+MERFIT+
Sbjct: 63  YRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENGVTVYEADVRPPERYLMERFITS 122

Query: 133 PVLFGGTPSAEGLLLDAQMKPDPGYRPNLRLVSLDIETTAQGELYSIALEGCGERQVYML 192
           PV   G     G++ +A++KP   YRP L+ VSLDIETT  GELY I LEGCG+R VYML
Sbjct: 123 PVWVDGE-MRNGVIRNARLKPHSDYRPPLKWVSLDIETTRHGELYCIGLEGCGQRTVYML 181

Query: 193 GPPNGDDRGVDFQLEYCDSRTLLLKKLNEWFARHDPDAIIGWNVVQFDLRVLHEHARRLA 252
           GP NGDD  +DF+L Y  SR  LL+KLN WFA HDPD IIGWNVVQFDLR+L +HA R  
Sbjct: 182 GPANGDDHQLDFELVYVASRPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKHAERYR 241

Query: 253 VPLKLGRGGEEMHWREHGSGNH-YFASAAGRLIIDGIESLRSATWSFPSFSLENVAQTLL 311
           +PL+LGR   E+ WREHG  N  +FA A GR+IIDGI++L+SA W+F SFSLE V+Q LL
Sbjct: 242 IPLRLGRDNSELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQELL 301

Query: 312 GEGKSIDNPYQRMDEINRMFAEDKPALAKYNLKDCELVTRIFAKTELLTFLLERASVTGL 371
           GEGKSIDNP+ RMDEI+R FA+DKPALA YNLKDCELVTRIF KTE++ FLLERA++ GL
Sbjct: 302 GEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMPFLLERATINGL 361

Query: 372 PADRSGGSVAAFTHLYMPLMHRQGFVAPNLGGKPPQASPGGFVMDSQPGLYESVLVLDYK 431
           P DR GGSVAAF HLY P MHR G+VAPNLG  PP ASPGG+VMDSQPGLY+SVLVLDYK
Sbjct: 362 PVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASPGGYVMDSQPGLYDSVLVLDYK 421

Query: 432 SLYPSIIRTFLIDPVGLIEGLKHPDDSESVPGFRGARFSRTRHCLPAIVARVAEGRETAK 491
           SLYPSIIRTFLIDPVGL+EG+  PD   S  GF  A FSR +HCLP IV+++  GR+ AK
Sbjct: 422 SLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVSQIWHGRDEAK 481

Query: 492 REHNVPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHEIMLRTRQLIEAQGHAV 551
           R+ N PLSQALKIIMNAFYGVLG++ CRFFD RLASSIT+RGH IM +T+ LIEAQG+ V
Sbjct: 482 RQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYDV 541

Query: 552 IYGDTDSTFVWLRRAHGQAEAAQIGHALVDHVNQWWREHVKQEYGLESALELQFETHYKR 611
           IYGDTDSTFVWLRRAH +A+AA+IGH LV HVN+WW + ++Q+  L SALEL+FETH+ R
Sbjct: 542 IYGDTDSTFVWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQ-NLTSALELEFETHFCR 600

Query: 612 FLMPTIRGAEEGSKKRYAGLVTRADGTDEMVYKGLETVRTDWSPLARQFQQELYLRIFNR 671
           FLMPTIRGA+ GSKKRYAGL+   D +  MV+KGLETVRTDW+PLA++FQQELYLR+F  
Sbjct: 601 FLMPTIRGADTGSKKRYAGLIQEGD-SQRMVFKGLETVRTDWTPLAQRFQQELYLRVFRN 659

Query: 672 KPYQDYVRDYVRKTLAGEFDERLIYRKRLRRTLDDYQRNVPPHVRAARIADDYNDQQGRP 731
           +PYQDYVR+ + K +AGE D +L+YRKRLRR L +YQRNVPPHVRAAR+AD+ N +QGRP
Sbjct: 660 EPYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVPPHVRAARLADEQNLKQGRP 719

Query: 732 RQYQNGGWISYVITVAGPEPLEIRSAPIDYDHYVTRQLQPVADAILPFVDDDFSTLIGGQ 791
            QYQN G I YV TV GPEP++ + +P+DY+HY+TRQLQPVA+ ILPFV+D+F+TL+ GQ
Sbjct: 720 AQYQNRGAIKYVWTVNGPEPVDYQQSPLDYEHYLTRQLQPVAEGILPFVEDNFATLLTGQ 779

Query: 792 LGLF 795
           LGLF
Sbjct: 780 LGLF 783