Pairwise Alignments

Query, 368 a.a., FOG: GGDEF domain from Pseudomonas fluorescens FW300-N1B4

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  122 bits (305), Expect = 2e-32
 Identities = 104/365 (28%), Positives = 161/365 (44%), Gaps = 21/365 (5%)

Query: 6   IQRLLLKRFALAAGTYALALLLLWLAFFTGHYDESIAGMAIGSALVVLSQAVLFAVFSSG 65
           +++L ++      G++  A++L WL +        +  M +      +  A+ FA   + 
Sbjct: 19  LEQLFVQSAPAVLGSFLAAVMLCWLGWERFDPQRVMVWMTLLGVSTGVRTAMFFAYLRAP 78

Query: 66  RNLRFSDPSLTEVQILLGL-----GWQTWLIAHLDEARGAFLVFYPLILLFGLFHLSRMA 120
            N R ++       + L L     GW  + +   D+A G       LI+LF +       
Sbjct: 79  ANQRTAERWEWRYWVTLMLSAAIWGWGAFAVMPADDALGQ-----TLIMLFAV------G 127

Query: 121 FARCAFLVFFSFSAITLWEGYHFQLPDPTLALLQVCVLFVVLGWLVL-YARYVQMSRQRM 179
            +  A   + S+  +TL       LP     LLQ   L   +   VL +A +V  + Q +
Sbjct: 128 MSVSAVSCYSSYRNMTLVSMGLVLLPSTGWLLLQPSTLQQGIALAVLVFAWFVVSATQSL 187

Query: 180 RQRRFALQAHQDTLRGMMRQLEGLVATDELTGLFNRRHFLRLASRE-LNAMETDVVHGLA 238
                     +  ++   R       TDELTGL NRR F   AS + +   +      + 
Sbjct: 188 SSALTTAWRLKHEMQRAHRLAMVASCTDELTGLNNRRAFFDNASAQHVRCRDAGTFMAVL 247

Query: 239 LIDLDHFKRINDVHGHAAGDQVLQAFAGVATACLRDGDVLARYGGEEFVVLLPDCDAERL 298
           ++D+DHFK+IND  GHAAGDQVLQ      +A LRD D+  R GGEEF +LLP+   +  
Sbjct: 248 MLDVDHFKQINDTFGHAAGDQVLQRIGAAISASLRDNDIAGRLGGEEFAILLPNTPPDTA 307

Query: 299 TACCERLRIAFMDVELVGLDVRNLSLSVGMTLL-ALDDDLDDALHRADQALYRAKRDGRN 357
               ERLR     + +   D   ++ S+G+    A   +L   L  AD A+Y +K  GRN
Sbjct: 308 IEVAERLRALIAKLRV--NDEHPVTASIGLAFAKAPATELGALLSSADSAMYLSKVSGRN 365

Query: 358 RCAAA 362
           R   A
Sbjct: 366 RVTVA 370