Pairwise Alignments

Query, 368 a.a., FOG: GGDEF domain from Pseudomonas fluorescens FW300-N1B4

Subject, 410 a.a., diguanylate cyclase, csgD regulator from Escherichia coli BL21

 Score =  120 bits (300), Expect = 9e-32
 Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 3/165 (1%)

Query: 199 QLEGLVATDELTGLFNRRHFLRLASR-ELNAMETDVVHGLALIDLDHFKRINDVHGHAAG 257
           QLE     D +TGL NRR F  +    ++  +     + L LID D FK IND++GH+ G
Sbjct: 248 QLEHAAHHDAMTGLLNRRQFYHITEPGQMQHLAIAQDYSLLLIDTDRFKHINDLYGHSKG 307

Query: 258 DQVLQAFAGVATACLRDGDVLARYGGEEFVVLLPDCDAERLTACCERLRIAFMDVELVGL 317
           D+VL A A    +C R GD++ R+GGEEFV+LLP    +   +  E +R++   V + GL
Sbjct: 308 DEVLCALARTLESCARKGDLVFRWGGEEFVLLLPRTPLDTALSLAETIRVSVAKVSISGL 367

Query: 318 DVRNLSLSVGMTLLALDDDLDDALHRADQALYRAKRDGRNRCAAA 362
                ++S+G+     ++ +D+   R D ALYRAK DGRNR  AA
Sbjct: 368 P--RFTVSIGVAHHEGNESIDELFKRVDDALYRAKNDGRNRVLAA 410