Pairwise Alignments

Query, 353 a.a., Holliday junction DNA helicase RuvB from Pseudomonas fluorescens FW300-N1B4

Subject, 345 a.a., Holliday junction DNA helicase, RuvB subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  384 bits (986), Expect = e-111
 Identities = 191/318 (60%), Positives = 244/318 (76%), Gaps = 2/318 (0%)

Query: 22  DRAIRPVSLAEYIGQPTVREQMELFIQAARGRNESLDHTLIFGPPGLGKTTLANIIAQEM 81
           ++A+RP+S  ++ GQ  + + +++F+ AA+ R ESLDH L+ GPPGLGKTTL++IIA E+
Sbjct: 21  EKALRPLSFDDFTGQQKIVDNIQVFVMAAKKRGESLDHVLLHGPPGLGKTTLSHIIANEL 80

Query: 82  GVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSPIVEEVLYPAMEDFQLDIMI 141
             S+K TSGPVL++P DLA LLTNLE  DVLFIDEIHRL+ +VEE LY AMEDF++DIM+
Sbjct: 81  ESSLKITSGPVLDKPSDLAGLLTNLEEGDVLFIDEIHRLNAVVEEYLYSAMEDFRIDIML 140

Query: 142 GEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYNTADLATIVSRSANI 201
             GP ARS+++ L PFTL+GATTR+G+LT+PLR RFGI  RLE+Y+   L TIV+RSANI
Sbjct: 141 DSGPNARSVQISLNPFTLIGATTRSGLLTSPLRARFGINARLEYYDAKLLTTIVTRSANI 200

Query: 202 LGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITKPIADLALNLLDVDER 261
           LG P+D   A+EIARR+RGTPRIAN LLRR RDFA+++  G IT  IA +AL+ LDVDE 
Sbjct: 201 LGAPIDEVAAYEIARRSRGTPRIANTLLRRTRDFADIKGNGTITLDIAKVALDALDVDEN 260

Query: 262 GFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQGYIMRTPRGRV 321
           G D  D R+L T+IEKF GGPVG+ ++A A  EE  TIE+V EP+LIQ+GY+ RT RGR+
Sbjct: 261 GLDEMDNRILTTIIEKFKGGPVGISTIATACGEEGETIEEVYEPFLIQEGYLKRTSRGRI 320

Query: 322 VTRHAYLHFGLNIPSRLG 339
            T  AY H  LNI    G
Sbjct: 321 ATELAYKH--LNIRPHFG 336