Pairwise Alignments

Query, 353 a.a., Holliday junction DNA helicase RuvB from Pseudomonas fluorescens FW300-N1B4

Subject, 336 a.a., ATP-dependent DNA helicase, component of RuvABC resolvasome from Escherichia coli BL21

 Score =  484 bits (1246), Expect = e-141
 Identities = 247/342 (72%), Positives = 288/342 (84%), Gaps = 6/342 (1%)

Query: 1   VIEADRLIAATGGPRDREEVQDRAIRPVSLAEYIGQPTVREQMELFIQAARGRNESLDHT 60
           +IEADRLI+A  G    E+V DRAIRP  L EY+GQP VR QME+FI+AA+ R ++LDH 
Sbjct: 1   MIEADRLISA--GTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHL 58

Query: 61  LIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRL 120
           LIFGPPGLGKTTLANI+A EMGV++++TSGPVLE+ GDLAA+LTNLEPHDVLFIDEIHRL
Sbjct: 59  LIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRL 118

Query: 121 SPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV 180
           SP+VEEVLYPAMED+QLDIMIGEGPAARSIK+DLPPFTL+GATTRAG LT+PLRDRFGIV
Sbjct: 119 SPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 178

Query: 181 QRLEFYNTADLATIVSRSANILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRA 240
           QRLEFY   DL  IVSRSA  +GL +  +GA E+ARRARGTPRIANRLLRRVRDFAEV+ 
Sbjct: 179 QRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKH 238

Query: 241 KGHITKPIADLALNLLDVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIE 300
            G I+  IA  AL++L+VD  GFD+ DR+LLL +I+KF GGPVG+D+LAAAI EER TIE
Sbjct: 239 DGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIE 298

Query: 301 DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRLGEMP 342
           DVLEPYLIQQG++ RTPRGR+ T  A+ HFG+  P    EMP
Sbjct: 299 DVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPP----EMP 336