Pairwise Alignments

Query, 220 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N1B4

Subject, 260 a.a., amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  122 bits (305), Expect = 8e-33
 Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 15/213 (7%)

Query: 18  LWQGFLTSVQCSALAILLGTLVGIVAGLVLTYGTFWMRAPFRFYVDIIRGTPVFVLVLAC 77
           L +GF  +V  S LAI +GT +G+V G++       +RAP   YV I R  P  VL+ A 
Sbjct: 49  LAKGFAMNVLISILAIAIGTFIGVVLGIMELAPYRIVRAPALTYVQIFRNAPHLVLIFAA 108

Query: 78  FYMAPALGWQISAFG---------AGTLGLTLFCGSHVAEIVRGALQALPSGQMEASKAI 128
            Y+ P   ++I AFG            +GL +   +H+AEI RGA+Q++P+ Q EA++ +
Sbjct: 109 TYIFP---FEIVAFGNYIPFPDWIKAVVGLAIPASAHIAEITRGAIQSIPTAQWEAAQGL 165

Query: 129 GLTFYQALGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELL---LSTQQIIART 185
           G +  Q L +++LPQ +++ LP W+N  + I   + L S++GV ELL         + R 
Sbjct: 166 GFSRNQTLRWIILPQCVKRSLPPWMNLYSSITMGTALASLVGVHELLHAATDASTAVQRN 225

Query: 186 FMTLEFYLFAGLLFFIINYAIELLGRHIEKRVA 218
             T+  YL   + FF+  Y +    + +E+R A
Sbjct: 226 DFTVVVYLTVLMAFFLFCYPVSRFTQRLERRFA 258