Pairwise Alignments

Query, 501 a.a., Gamma-aminobutyrate permease from Pseudomonas fluorescens FW300-N1B4

Subject, 466 a.a., gamma-aminobutyrate transporter (NCBI) from Escherichia coli BW25113

 Score =  523 bits (1346), Expect = e-153
 Identities = 262/434 (60%), Positives = 323/434 (74%), Gaps = 1/434 (0%)

Query: 45  QLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGLLVVLVMRMLGEM 104
           +L  G K RHVTMLSIAG+IGA LFVGS  AIA AGPAVLLAYLF+GLLVV++MRML EM
Sbjct: 9   ELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEM 68

Query: 105 AVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHVLNQWFPQIDTWL 164
           AVA PDTGSFSTYAD+AIGRWAG+TIGWLYWWFWVLVIP+EA  A  +L+ W P I  WL
Sbjct: 69  AVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPIWL 128

Query: 165 FALTSIILLVVTNLFSVSKYGEFEFWFAMAKVVAIIGFIGLGFAVLMGWIPEREASGLSR 224
           F+L   + L  +NL SV  YGEFEFW A+ KV+AI+ FI LG   + G+ P  E SG+SR
Sbjct: 129 FSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPYAEVSGISR 188

Query: 225 LMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIAKATRSVIWRIGV 284
           L +  GGF PNG  AV+ A +  MFSF+G E VTIAAAES  P ++I +AT SVIWRI +
Sbjct: 189 LWDS-GGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISI 247

Query: 285 FYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLMVDVVVLIAVASCMNSSIYI 344
           FYL SIFVV++++PWN P L +VGSY+  LEL+NIPHAKL++D V+L++V SC+NS++Y 
Sbjct: 248 FYLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYT 307

Query: 345 ASRMLFSLGKRGDAPKPLKVTSSDGVPRAAVIASTVLGAGVTLFSYFMPAGLFQFLLASS 404
           ASRML+SL +RGDAP  +   +    P  AV+ ST       + +Y+ PA +F+FL+ SS
Sbjct: 308 ASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSS 367

Query: 405 GAIALLVYLVIAVSQLRMRKILLRQNVTLTFKMWLFPWLTWLVIAFICAALAVMMVTPEH 464
           GAIALLVYLVIAVSQLRMRKIL  +   +  +MWL+PWLTWLVI FI   L VM+  P  
Sbjct: 368 GAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQ 427

Query: 465 RMEVSSTIGLALVI 478
           ++EV ST  LA+ I
Sbjct: 428 QLEVISTGLLAIGI 441