Pairwise Alignments

Query, 501 a.a., Gamma-aminobutyrate permease from Pseudomonas fluorescens FW300-N1B4

Subject, 457 a.a., aromatic amino acid transporter (NCBI) from Escherichia coli BW25113

 Score =  288 bits (738), Expect = 2e-82
 Identities = 156/425 (36%), Positives = 236/425 (55%), Gaps = 17/425 (4%)

Query: 45  QLAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGLLVVLVMRMLGEM 104
           QL +G K RH+ ++++ G IG GLF+GS   I +AGP ++L Y  +G +  L+MR LGEM
Sbjct: 10  QLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEM 69

Query: 105 AVANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHVLNQWFPQIDTWL 164
            V  P  GSFS +A +  G +AGF  GW YW  +VLV   E  A G  +  W+P+I TW+
Sbjct: 70  VVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWV 129

Query: 165 FALTSIILLVVTNLFSVSKYGEFEFWFAMAKVVAIIGFIGLGFAVLMGWI-------PER 217
            A    +++   NL +V  +GE EFWFA+ KV+A++  I  G     GW+       P+ 
Sbjct: 130 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFG-----GWLLFSGNGGPQA 184

Query: 218 EASGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIAKATRS 277
             S L     + GGF P+G + +V     IMFSF G E V I AAE+ NP Q+I KAT  
Sbjct: 185 TVSNL----WDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ 240

Query: 278 VIWRIGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLMVDVVVLIAVASC 337
           VI+RI +FY+ S+ V++S++PW   + A    +      +        +++VVL A  S 
Sbjct: 241 VIYRILIFYIGSLAVLLSLMPWT-RVTADTSPFVLIFHELGDTFVANALNIVVLTAALSV 299

Query: 338 MNSSIYIASRMLFSLGKRGDAPKPLKVTSSDGVPRAAVIASTVLGAGVTLFSYFMPAGLF 397
            NS +Y  SRMLF L ++G+APK L      GVP   ++ S ++ A   L +Y  P   F
Sbjct: 300 YNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAF 359

Query: 398 QFLLASSGAIALLVYLVIAVSQLRMRKILLRQNVTLTFKMWLFPWLTWLVIAFICAALAV 457
             L+A   +  ++ + +I+++ ++ R+    Q V   F   L+P   W+ + F+ A L +
Sbjct: 360 GLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVI 419

Query: 458 MMVTP 462
           M++TP
Sbjct: 420 MLMTP 424