Pairwise Alignments

Query, 284 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  204 bits (520), Expect = 2e-57
 Identities = 108/262 (41%), Positives = 162/262 (61%), Gaps = 3/262 (1%)

Query: 21  RLAMGLGLTILFGWLVLAIFAPWIAPFDPIAQNT-DIRLVAPHLA-HPFGTDNFGRDVLS 78
           RLA+ LGL I+   L +A+FA  +AP +P+  +  + RL+ P  A +  GTD+ GRD+LS
Sbjct: 43  RLAL-LGLVIIIALLFVALFADVLAPHNPVQGDLRNARLLPPGTAGYLLGTDDQGRDILS 101

Query: 79  RVIWSARIDLQLAVIGVIFPFLIGTCVGALSGYIGGRFDTFCMRLIDIILAFPFLVLMLA 138
           R+I  +R+ L + ++  I    IG  VG +SGY GG  D   MR+ DI LAFP LVL LA
Sbjct: 102 RLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRITDIFLAFPKLVLALA 161

Query: 139 IMAILGPGLMSFYIAMALVGWVSYARLIRSQILILKESDFALAAKSLGFGHGRILFRHLL 198
           ++A LGPG+ +  +A+A+  W  YAR+ R++ +  + SDF  A K +G    RI+ +H++
Sbjct: 162 LVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKLMGASPFRIVLKHVM 221

Query: 199 PNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQSFITSAWWICTFP 258
           P  +   IV    D   ++L  A + +LGLG QPP  EWG M+A G+ FI   WW+   P
Sbjct: 222 PLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASGRRFILDQWWVAAMP 281

Query: 259 GLAIVTLAMGFSLLADAVAEHL 280
           G+AI+ +++GF+LL D + + L
Sbjct: 282 GIAILIVSLGFNLLGDGLRDAL 303