Pairwise Alignments

Query, 284 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 295 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  220 bits (561), Expect = 3e-62
 Identities = 114/289 (39%), Positives = 174/289 (60%), Gaps = 11/289 (3%)

Query: 1   MSSQATTVPRLNLRLG---------LRNPRLAMGLGLTILFGWLVLAIFAPWIAPFDPIA 51
           M+++A T  RL + L          L++P  A GL + +L   ++ AIFAPW+A  DP A
Sbjct: 1   MTARAETSSRLPVPLNALKNIILFLLKSPTSAFGLAVLLLL--VIAAIFAPWLATHDPYA 58

Query: 52  QNTDIRLVAPHLAHPFGTDNFGRDVLSRVIWSARIDLQLAVIGVIFPFLIGTCVGALSGY 111
           Q+    L AP   H FGTD  GRD+ SR++W ARI L +  +  I    +G  VG  SGY
Sbjct: 59  QDLANTLQAPGNGHVFGTDELGRDIYSRLLWGARITLTIISLVSIIVGPVGLLVGTASGY 118

Query: 112 IGGRFDTFCMRLIDIILAFPFLVLMLAIMAILGPGLMSFYIAMALVGWVSYARLIRSQIL 171
           +GG+FDT  MR+ DI L+FP L+L LA +A LGP L +  IA+AL  W   ARL R++ +
Sbjct: 119 LGGKFDTVMMRITDIFLSFPSLILSLAFVAALGPSLNNAIIAIALTSWPPIARLARAEAM 178

Query: 172 ILKESDFALAAKSLGFGHGRILFRHLLPNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQ 231
             +++D+  AA+  G    RI+ + ++P  +   ++    +   V+L  A + +LGLG Q
Sbjct: 179 TFRKADYIAAARLQGASPLRIIVKSIMPMCLPSVLIRLTLNMATVILTAAGLGFLGLGAQ 238

Query: 232 PPTAEWGTMVAEGQSFITSAWWICTFPGLAIVTLAMGFSLLADAVAEHL 280
           PP  EWG M+A G+ ++  +WW+ TFPG+AI+++++ F+LL D + + L
Sbjct: 239 PPLPEWGAMIATGRRYMLDSWWLVTFPGVAILSVSLAFNLLGDGLRDAL 287