Pairwise Alignments

Query, 284 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N1B4

Subject, 300 a.a., ABC transporter, membrane spanning protein (dipeptide) from Agrobacterium fabrum C58

 Score =  218 bits (555), Expect = 1e-61
 Identities = 110/278 (39%), Positives = 168/278 (60%), Gaps = 1/278 (0%)

Query: 3   SQATTVPRLNLRLGLRNPRLAMGLGLTILFGWLVLAIFAPWIAPFDPIAQNTDIRLVAPH 62
           +QA    R  + L L++  LA+ +GLTI+  ++ L++ AP IAP+DP  QN   RL  P+
Sbjct: 19  TQAAWGNRYRIWLNLKSNPLAV-IGLTIIVLFIALSLLAPAIAPYDPATQNLGNRLAFPN 77

Query: 63  LAHPFGTDNFGRDVLSRVIWSARIDLQLAVIGVIFPFLIGTCVGALSGYIGGRFDTFCMR 122
             H FGTD  GRD+LSR+++  R+ L + +  V+    IG  +G ++GY GG  DT  MR
Sbjct: 78  AEHWFGTDELGRDILSRILYGGRVTLGMVIAVVVLVAPIGLAIGCIAGYFGGIVDTVLMR 137

Query: 123 LIDIILAFPFLVLMLAIMAILGPGLMSFYIAMALVGWVSYARLIRSQILILKESDFALAA 182
           + D+ LAFP L+L LA +A L PG+ S  +A+AL  W  YARL R++ + ++ SDF  A 
Sbjct: 138 VTDVFLAFPRLILALAFVAALKPGVESAILAIALTAWPPYARLARAETMTVRGSDFVAAY 197

Query: 183 KSLGFGHGRILFRHLLPNAMFGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVA 242
           +  G    RI+ RH+ P  +   IV    D   +++  A++ +LG+G QPP+ EWG M+A
Sbjct: 198 RLTGASAWRIIARHIAPLCVPSLIVRITLDMSSIIITAASLGFLGMGAQPPSPEWGAMIA 257

Query: 243 EGQSFITSAWWICTFPGLAIVTLAMGFSLLADAVAEHL 280
             + FI   WW+ T PG+AI  +++ F+ L D + + L
Sbjct: 258 TAKRFIFEQWWVATIPGIAIFLVSLAFNFLGDGLRDVL 295