Pairwise Alignments

Query, 428 a.a., Nitrate ABC transporter, nitrate-binding protein from Pseudomonas fluorescens FW300-N1B4

Subject, 401 a.a., putative Sulfonate ABC transporter, periplasmic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 42/286 (14%)

Query: 15  RRTFLKQS--LVTAGTVAGIAALDVVVPGFLRSAVWAAGSDAPEKAALKVGFIPLTDCAS 72
           RR FLK    L  AG +  +++L          A  AA  DAP    +++G++P+TD   
Sbjct: 12  RRDFLKLGAMLTAAGALPLLSSLQ---------ARAAAEPDAP----VRIGYLPITDATP 58

Query: 73  VVVAATQGFGEKYGLTIT-PSKEASWAGVRDKLLNGELDAAHVLYGLIYGVQLGIGGPQK 131
           ++VA   G  E  G+    P    SWA V +  ++G+++  H+L  +    + G   P K
Sbjct: 59  LLVAHNNGLFEAEGIKAERPVLLRSWAQVIEAFISGQVNVIHLLSPMTVWARYGSKVPAK 118

Query: 132 DMAMLMGLNQNGQAITLSNQLQQAGVTNGEQLAAKVKQGGTPLTFAQTFPTGTHAMWLNY 191
            +A               N +  +G+T    ++A  + GG   T A  F    H + L  
Sbjct: 119 VVAW--------------NHVGGSGLTVAPDISAVKQLGGK--TVAIPFWYSIHNVVLQQ 162

Query: 192 WLASLGINPLT----------DVKTIVVPPPQMVANMRVGNMDGFCVGEPWGARAIADNI 241
            L   G+ P++          +V  +V+PP  M   +    + G+ V EP+ A A    +
Sbjct: 163 LLNDNGLTPVSKPANAQLAANEVNLLVLPPSDMPPALASKRIAGYIVAEPFNALAENLKV 222

Query: 242 GFTALTTQKLWPDHPEKILGTTRAFVEQYPNTARALTMAVLDASRF 287
           G     T  +W +H   ++      +   P  ++ +  A++ A ++
Sbjct: 223 GRVQRFTGDVWRNHACCVVFMHEHDLNNRPEWSQKVVNAIVKAQQW 268