Pairwise Alignments

Query, 272 a.a., Glycerol-3-phosphate regulon repressor from Pseudomonas fluorescens FW300-N1B4

Subject, 257 a.a., DNA-bindng transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  134 bits (336), Expect = 3e-36
 Identities = 79/258 (30%), Positives = 139/258 (53%), Gaps = 3/258 (1%)

Query: 15  MIPEQRRELMLRQLRKHQVLSVHQLMEMFDCSHMTIRRDIALLEQEGRAYSVTGGVRIAS 74
           M P QR+  +L  L+K    SV +L + FD +  TIR+D+ +LE  G      GGV + +
Sbjct: 1   MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGV-VLN 59

Query: 75  QLHSEPSHQFKAVVELPQKQAMAKLAARLLHADMTIYLDAGTSTLEIVPYIKALSGMTVV 134
           +  S+P    K ++   +K+ +A+ A   +H   +I LDAG++ L++VP +   + +TV+
Sbjct: 60  KEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVM 119

Query: 135 TNDFGIVQALIDAPH-VTVIHTGGQLDHSNQSCVGGLAVATLRQIVTDIAFISTSSWDLR 193
           TN   IV AL +  +  T++  GG     + S  G LA         D  F+ T   DL 
Sbjct: 120 TNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLN 179

Query: 194 RGLTTPSALKVEVKQVAMQSASQVVLVASSSKYGTFSMYRIAGLEQFDIILSDDALTPAA 253
            G+TT + +   V +    +A +V+L+A SSK+G  S   +  LE  D +++D  + PA 
Sbjct: 180 AGVTTFNEV-YTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAF 238

Query: 254 ADSIRKQGVELLLPGDNN 271
             ++ ++G+++++ G++N
Sbjct: 239 RQALEEKGIDVIITGESN 256