Pairwise Alignments

Query, 283 a.a., Protein rarD from Pseudomonas fluorescens FW300-N1B4

Subject, 294 a.a., chloramphenical resistance permease RarD from Pseudomonas simiae WCS417

 Score =  108 bits (269), Expect = 2e-28
 Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 15/273 (5%)

Query: 1   MLFAVMYYYTSLLSPLSGVEIFGWRMLLTAPCMTVFMVVSGEWKRVVEIVRRLAGKPKLI 60
           +++ +   Y   ++ +   EI   R+L +A    + ++V   WK      R L   PK +
Sbjct: 18  VIWGLFPLYFKAIASVPAAEIIVHRVLWSALFGGLLLMV---WKHPGWF-RELRDNPKRL 73

Query: 61  VGLIGSAVLLGLQLWLFMWAPLNGYSLDVSLGYFLLPLSMVLTGRIVYGERLSYLQKIAV 120
             L  S  L+      ++W+   G  L+ SLGY++ PL  V+ G ++ GERL  LQ +AV
Sbjct: 74  AILALSGSLIAGNWLTYVWSVNTGRMLEASLGYYINPLVNVVLGMLILGERLRRLQWVAV 133

Query: 121 FFASLGVLNELYQVGGFSWATLLVVVGYPIYFILRKRLATDNLGGLWLDMALMLPVAF-W 179
             A++GV  +++QVG   W +L++ + +  Y ++RK+     L GL ++  +++P+A  W
Sbjct: 134 GLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLVVETWMLVPIAVAW 193

Query: 180 FV-----QGGEQGFGVFDQHPWLSLLIPILGVISASALVVYIIASRLLPFSLFGLLSYVE 234
            +        +  F    +  WL       G ++   LV +  A+R LP++  G L YV 
Sbjct: 194 LLFNPTAHSAQMAFWSTSEAWWL----VAAGPVTLIPLVCFNAAARHLPYTALGFLQYVA 249

Query: 235 PVL-LLGVALLLGESIKAGEWLTYIPIWLAVLV 266
           P L LL   LL GE +       +  IW  ++V
Sbjct: 250 PTLVLLEAVLLFGEHLAPSTLTAFAFIWAGLVV 282