Pairwise Alignments

Query, 283 a.a., Protein rarD from Pseudomonas fluorescens FW300-N1B4

Subject, 304 a.a., putative permease (RarD protein) from Pseudomonas putida KT2440

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 20/278 (7%)

Query: 2   LFAVMYYYTSLLSPLSGVEIFGWRMLLTAPCMTVFMVVSGEWKRVVEIVRRLAGKPKLIV 61
           L  +   Y   L+ L  + + G R+L++  C+T+ +    E   ++ +++R        +
Sbjct: 21  LLGLSSLYWKALAALPALALLGCRVLMSLLCVTLLLAARKELVPLLCVLKRRD------I 74

Query: 62  GLIGSAVLLGLQLW-LFMWAPLNGYSLDVSLGYFLLPLSMVLTGRIVYGERLSYLQKIAV 120
            L G+A +L    W  F+WA ++G+ L+  LGY + P+  +  G ++Y ERLS  + +++
Sbjct: 75  ALHGAAAVLVAGNWGTFIWASIHGHVLESGLGYLIAPVLGISLGLLLYQERLSVPRGLSL 134

Query: 121 FFASLGVLNELYQVGGFSWATLLVV-VGYPIYFILRKRLATDNLGGLWLDM----ALMLP 175
                 V+  L++ GG      LV+ V +  Y  L+K        GL+L+      L++P
Sbjct: 135 TMVIGSVVYLLFEKGGLDSRVFLVIGVTWGTYTWLKKLARLPPWSGLFLESLVLGVLLMP 194

Query: 176 VAFWFVQ--GGEQGFGVFDQHPWLSLLIPILGVISASALVVYIIASRLLPFSLFGLLSYV 233
           +  W      G    G  D     + L+ + G +S   L ++  A+R LP S+ GL+ +V
Sbjct: 195 LILWVSTPVAGIAALGSAD-----TALLLLCGAVSLLPLALFSFAARRLPLSVMGLMQFV 249

Query: 234 EPVLLLGVALLL-GESIKAGEWLTYIPIWLAVLVLVFE 270
            P+    VAL+  G+    G  L +  I LA+L+++ E
Sbjct: 250 LPLTQFFVALMFYGQIPSHGAMLAFALIALAMLLVILE 287