Pairwise Alignments

Query, 283 a.a., Protein rarD from Pseudomonas fluorescens FW300-N1B4

Subject, 295 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 8e-29
 Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 23/286 (8%)

Query: 1   MLFAVMYYYTSLLSPLSGVEIFGWRMLLTAPCMTVFMVV---SGEWKRVVEIVRRLAGKP 57
           +++ +   Y   +  +  VEI   R+L +A   ++ ++V    G W+ +    RRL    
Sbjct: 18  IIWGLFPLYFKAIQSVPAVEIIVHRVLWSALFGSLLLLVWKHPGWWRELRNNPRRLG--- 74

Query: 58  KLIVGLIGSAVLLGLQLWL-FMWAPLNGYSLDVSLGYFLLPLSMVLTGRIVYGERLSYLQ 116
             I+ L G+ +      WL ++W+  NG  L+ SLGY++ PL  VL G ++ GERL  LQ
Sbjct: 75  --ILALSGALIAGN---WLTYVWSVNNGRMLEASLGYYINPLINVLLGMLILGERLRRLQ 129

Query: 117 KIAVFFASLGVLNELYQVGGFSWATLLVVVGYPIYFILRKRLATDNLGGLWLDMALMLPV 176
            +AV  A++GV  +++QVG   W +L++ + +  Y ++RK+     L GL ++  +++P+
Sbjct: 130 WLAVGMAAVGVAQQVWQVGSLPWVSLVLALSFGFYGLIRKQAPVAALPGLVVETWMLVPL 189

Query: 177 AF-WFV-----QGGEQGFGVFDQHPWLSLLIPILGVISASALVVYIIASRLLPFSLFGLL 230
           A  W +        +  F    +  WL       G ++   LV +  A+R LP++  G L
Sbjct: 190 ALGWLLLHPTAMSAQGAFYTSSEALWLM----AAGPVTLVPLVCFNAAARHLPYTTLGFL 245

Query: 231 SYVEPVL-LLGVALLLGESIKAGEWLTYIPIWLAVLVLVFEGFKHL 275
            Y+ P L LL   +L  E + +     ++ IW  + +   + + +L
Sbjct: 246 QYLAPTLVLLQAVVLFDEHLSSSTLAAFMFIWAGLAIYSVDAWLNL 291