Pairwise Alignments

Query, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  287 bits (734), Expect = 1e-81
 Identities = 163/373 (43%), Positives = 236/373 (63%), Gaps = 9/373 (2%)

Query: 167 VALNAADAKAASAKAGEHYSEAFIGIVTVAVMASLLTVLLAWLLTRSILTPLNRAVLAAE 226
           + L   DA++A A++ +  S          ++A L+ V+ A ++TR I  P+   +   E
Sbjct: 274 IQLTRRDAESAQARSLQLIS---------TLLALLVGVIAALVITRQITRPIQETLAVVE 324

Query: 227 TIAGGNLSKVIEVDGNDEPARLLGALAAMQTNLRKTIEQIAGSATQLGAAAEELSTVTQE 286
            IA G+LS  I+V   DE   L   +  M T LR+ I  I    TQ+ +AAEELS VT++
Sbjct: 325 RIASGDLSHNIQVTRRDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQ 384

Query: 287 ASRGLQQQNNEIEQAATAVNEMTAAVEEVARNAVSTSEASNQSTQAAREGRDRVVETVDA 346
            S G+  Q  E +Q ATA++EMTA V+EVARNA   S A+  +   AR G   V E +  
Sbjct: 385 TSAGVNSQKIETDQVATAMHEMTATVQEVARNAEQASLAAADADGQARAGDKVVAEAIAQ 444

Query: 347 IQTMTHDVQNTALMIEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGF 406
           I+ +  +V  +   +  L  +   IG V+DVI+A+AEQTNLLALNAAIEAARAGEAGRGF
Sbjct: 445 IERLAAEVARSTDAMTHLQQESNKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGF 504

Query: 407 AVVADEVRALAHRTAQSTQEIEKMVAGIQNGTGEAVSSMQQSNQRTQSTLEMARAAGIAL 466
           AVVADEVR LA RT +ST+EIE +VAG+QNGT +  + M  S   T S++E+ R AG++L
Sbjct: 505 AVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSL 564

Query: 467 EQITQSIQLINERNLVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAATHELS 526
           E IT+++  I   N  IA+A+E+Q+ V+ E+ R++VN+RD++ Q+A  +++T+ ++ EL+
Sbjct: 565 ENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELA 624

Query: 527 RLAVDLNAMVARF 539
           RL   L  MV+ F
Sbjct: 625 RLGSQLQQMVSHF 637