Pairwise Alignments

Query, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  450 bits (1158), Expect = e-131
 Identities = 253/541 (46%), Positives = 367/541 (67%)

Query: 1   MSLRNLKIAPRAFLGFAFIALLVIVLGVFAVNRMSIIRQASVDMEMTQLPSIGFLGNVTE 60
           MSLRN++I  RA L F  +A L++++G+F + +M+ +RQ+++ +E + +PSI  + +   
Sbjct: 1   MSLRNMRIGLRASLSFGVLASLLVIVGMFGLGQMAKLRQSALVIEASWMPSIENIHDSAA 60

Query: 61  NVLRLRILSFRVLVNRDPAALQEAQTRIGVLVDKVRSAQASYAALPAGPEEAALYKTFAT 120
            V  +R+ + R+    +      ++  I     ++++    +  L +G EE  +      
Sbjct: 61  IVASIRLEALRLATTDESRIRDNSKALITRQHTELQTLLDHHKTLLSGDEEREMLTQLEG 120

Query: 121 TLDNYIQAQSQMLDLSRQNKLEEMRALINTRIKEGTDQMGEQLNKLVALNAADAKAASAK 180
             + Y+    Q++ L  +++ ++   L+N+R+      + + L  ++  N +  + A   
Sbjct: 121 NANAYLSLVGQIVALVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQTAVDS 180

Query: 181 AGEHYSEAFIGIVTVAVMASLLTVLLAWLLTRSILTPLNRAVLAAETIAGGNLSKVIEVD 240
           A + YS A   + ++ V+A   T+LLAWLLTRSI  PL +A++ A TIA G+LS+ I V 
Sbjct: 181 AAQTYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDLSQPIAVS 240

Query: 241 GNDEPARLLGALAAMQTNLRKTIEQIAGSATQLGAAAEELSTVTQEASRGLQQQNNEIEQ 300
           G DEPA+LL ALA MQ  L+ T+  I+ SA QLG AAEE+S+V ++++R LQ QN+EIEQ
Sbjct: 241 GKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQ 300

Query: 301 AATAVNEMTAAVEEVARNAVSTSEASNQSTQAAREGRDRVVETVDAIQTMTHDVQNTALM 360
           AATAV EM+AAV+EVA NAVS++EAS  S + ++ G  ++ ET+ +IQ +  +V   +  
Sbjct: 301 AATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDEVLGASNK 360

Query: 361 IEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420
            EGLA Q +DI KVL+VIR IA QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RT
Sbjct: 361 AEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT 420

Query: 421 AQSTQEIEKMVAGIQNGTGEAVSSMQQSNQRTQSTLEMARAAGIALEQITQSIQLINERN 480
             ST+EIE+M+ GIQ GT   V ++  S ++   TL+ A +AG ALE+IT +I  I++RN
Sbjct: 421 QDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQRN 480

Query: 481 LVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAATHELSRLAVDLNAMVARFV 540
           LVIASA+E+QA V+R+VDR+LVNIRDL+TQ+AAGA QTSAA+ ELSRLAVDLN +VARFV
Sbjct: 481 LVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVARFV 540

Query: 541 I 541
           +
Sbjct: 541 L 541