Pairwise Alignments

Query, 490 a.a., FIG01200701: possible membrane protein from Pseudomonas fluorescens FW300-N1B4

Subject, 481 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  657 bits (1696), Expect = 0.0
 Identities = 340/498 (68%), Positives = 392/498 (78%), Gaps = 25/498 (5%)

Query: 1   MRIPLFYAVSVVLFLSGSSCLAQPLDASATTSASSTAPVTSVAKDAVFTQEQLDQMLAPI 60
           MR+PLF  +S +L LS +  L Q  D  A   A S A  T VAKD VF+QEQLDQMLAPI
Sbjct: 1   MRMPLFAFLSALLCLSAAPGLVQAADVPAPDPAPSAA--TLVAKDPVFSQEQLDQMLAPI 58

Query: 61  ALYPDPLLAQVLMATTYPGEIAEAVTWSKAHPDAKGDDAVKQVANQPWDPSVQALVAFPQ 120
           ALYPD LLAQVLMA+TYPG++ EAVTWSKA+P A GDDAV+QVA QPWDPSVQALVAFPQ
Sbjct: 59  ALYPDQLLAQVLMASTYPGQVNEAVTWSKANPKATGDDAVRQVAKQPWDPSVQALVAFPQ 118

Query: 121 VMATLGQDPVWVQRLGDAFLAQPDDVMGGVQRLRHQAQAAGNLQSNQYQNVTVQAAPASA 180
           V+ATLGQDPVWVQRLGDAFLAQPDDVMG VQRLRHQAQAAGNLQS+QYQNVTVQ APA A
Sbjct: 119 VLATLGQDPVWVQRLGDAFLAQPDDVMGSVQRLRHQAQAAGNLQSSQYQNVTVQTAPAPA 178

Query: 181 APAPAPATS-------TSTIIIQPSDPQVVYVPTYNPTTTYGTWPYPASPPVYYPPPPAY 233
             A   +T         +TI+I+P+DPQVVYVP+YNPTTTYGTW YPASPP+YYP     
Sbjct: 179 PAASGSSTQGAAASSPPTTIVIEPADPQVVYVPSYNPTTTYGTWAYPASPPMYYP----- 233

Query: 234 YPGSALLAGLAFGTGVAIIGSLWGDCDWDNNDIDIDVDRYNNINRNNQITRNQNNWQHNA 293
             GSAL+AGLAFGTGVAI+ SLWGDCDWDNNDIDIDV+RYNN+N NN+IT NQN WQHN+
Sbjct: 234 --GSALVAGLAFGTGVAIVASLWGDCDWDNNDIDIDVNRYNNLNVNNRITNNQNKWQHNS 291

Query: 294 VHRDGVPYRDSKSREQYGRQLDGARQREAYRGDNAQRAQAREKARGSMDKHGIERPATSN 353
            +RDGVPYRDS+SR+QYGRQLDGA QR A+RGD+AQRAQAR+KAR SMD+ GIERPATSN
Sbjct: 292 ANRDGVPYRDSRSRQQYGRQLDGATQRTAFRGDDAQRAQARDKARASMDRAGIERPATSN 351

Query: 354 REARDSARKAQSATSPGNRMQAGTDRPKASDRSQGTARSTRENQQPRKQTAQV-NQRGQG 412
           R+AR+  R+A++ +  GNRM +  D  +A+DR Q T      N Q R+Q   + NQR QG
Sbjct: 352 RQAREQMREAKAGSPDGNRMLSRDDGARATDRRQDT-----RNDQGRQQNGNLANQRRQG 406

Query: 413 DLQGRQTAQKRPAASTGSAGSARNNAFAGVRSPSQANAQASRGQASQASARRPSASRPAG 472
           D Q RQ AQ RPA    +AG ARNNAF GVRSPS+ + QA+RG+ SQ+ A+RP ASR AG
Sbjct: 407 DGQVRQPAQSRPA---NTAGRARNNAFDGVRSPSRTSVQANRGRTSQSFAQRPGASRAAG 463

Query: 473 HQVSRPSSPPARQRGGRR 490
           H +SRPS+P  R  GGRR
Sbjct: 464 HPISRPSAPARRGAGGRR 481