Pairwise Alignments

Query, 1031 a.a., Serine protease homologue from Pseudomonas fluorescens FW300-N1B4

Subject, 985 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  882 bits (2280), Expect = 0.0
 Identities = 511/1036 (49%), Positives = 647/1036 (62%), Gaps = 98/1036 (9%)

Query: 29   ALATLGTAHAAPYVENGRTGDPDSWRSTEFNADWGLGAINAQEAYAAGYTGKGVKLGIFD 88
            +L  L  A  A Y E+G+ G+  SWRS+EF +DWGLG + A EAYAAG TG GVK+G  D
Sbjct: 15   SLLLLSVAAQAAYTESGQPGNAASWRSSEFQSDWGLGRMKADEAYAAGITGSGVKIGALD 74

Query: 89   QPVYALHPEFSGANKVITLVTSGIREYTDPYIPVKAGDAFLYDGSPSVGSNGKLG----A 144
                  HPE S                 D Y  V A  +++ DGS +  + G L     +
Sbjct: 75   SGFDPNHPEAS----------------RDRYHAVSASGSYV-DGS-AFSTTGALNPNNDS 116

Query: 145  HGTHVGGIAAGSRDGGPMHGVAFGAQIISADNGDPGPEDGIIRGN--DGAVYKAGWDALI 202
            HGTHV G    +RDG  MHGVA+ AQ+     G+    D  + G   D   +KA + AL+
Sbjct: 117  HGTHVTGTMGAARDGVGMHGVAYNAQLYV---GNTNANDSFLFGPTPDPKYFKAVYSALV 173

Query: 203  ASGARIINNSWGIGITDRFDLGGRDPAYPHFTMQDAQLQFNEIQTLLGTKPGGAYNGAIA 262
             SG R INNSWG   +   D+  R  A  H         +N+         G   + A  
Sbjct: 174  DSGVRAINNSWG---SQPKDVSYRTLADLHAAYAQ---HYNQ---------GTWLDAAAD 218

Query: 263  AARSGIVTIFAAGNDYNLNNPDAIAGLGYFVPEIAPNWMTVAALQRNPDTSSPDPYNIST 322
             A++G++ +F+AGN     N    + L YF PE+  +W+ V+ L    D ++   YN   
Sbjct: 219  VAKAGVINVFSAGNS-GYANASVRSALPYFQPELEGHWLAVSGL----DKANNQKYN--- 270

Query: 323  FSSRCGYTASFCVSAPGSRIYSSIISGTNANDLTTGYANYNGTSMAAPHVAGAVAVLMER 382
               +CG    +C+S PG+ I S+I  G        GY   +GTSM+APH  GA+A++MER
Sbjct: 271  ---QCGIAKYWCISTPGALINSTIPDG--------GYGVKSGTSMSAPHATGALALVMER 319

Query: 383  FPYMTGAQVASVLRTTATDLGAP---GVDSLYGWGMINLRKGIDGPAMF----------- 428
            +PYMT  Q   VL TTAT L         +  GWG+ +L + + GP              
Sbjct: 320  YPYMTNEQALQVLLTTATQLDGSLTQAPTTTVGWGVPDLGRAMHGPGQLLGPMNVSLAAG 379

Query: 429  --------VTEQDIPEEFRIDGAYGSS--QFVADLP---GIGAIIDAGKPTERVCNDVHC 475
                    +++Q +      D    S+  Q + D     G+GA       T+        
Sbjct: 380  QGDVWSNGISDQALLRRQAEDAIEHSAWQQTLIDKGWQNGVGASASQQDQTDYAVGTARD 439

Query: 476  GLDVWRNDISGHGGLTKQGIGTLVLTGANTYAGPTLVNQGRLAINGSLLSAVTVNDSGIL 535
                 R      G L K G GTLVL+G +TY G T VN G LA+NGSL SAVTVNDSG L
Sbjct: 440  QAAATR---IYEGSLIKSGAGTLVLSGDSTYRGATTVNGGLLAVNGSLTSAVTVNDSGTL 496

Query: 536  GGNGSIAALTAKSGGTVAPGNSIGTLQVAGDVTFEPGSTYAVELSPTSSDQIIAGGKAVI 595
            GG+G IAAL+   GG VAPGNS+GTLQVAGDV    GSTYAVEL+P  SD+I+AGG+A++
Sbjct: 497  GGSGRIAALSVHPGGRVAPGNSVGTLQVAGDVNLGAGSTYAVELTPIDSDRIVAGGRAIL 556

Query: 596  EGATVSLSLENSPTLLTTSEAKSLLGNQYNILQAAGGIEGRFGAVVPDYLFLGGTLDYSA 655
             G  V+L+LENSPTLL+ ++A+SL+G QY ILQA GGI+G+FG V+PDYLFLGGTL Y+ 
Sbjct: 557  GGGNVTLALENSPTLLSGAQAQSLIGRQYTILQAVGGIQGQFGQVLPDYLFLGGTLAYAT 616

Query: 656  GGIQLAVVRNATSFTSVGQTPNQRAVAAAAEQLGAGNPLYETLLLSPTAAVAQQAFQQLS 715
             G+QL VVRN  +F SV  T NQR VAAAAEQLGAGNP+YE++L S + AVAQQ  QQLS
Sbjct: 617  DGVQLDVVRNDATFASVAATRNQRNVAAAAEQLGAGNPVYESVLQSDSIAVAQQGLQQLS 676

Query: 716  GEIHPAIGTLLINDSRYLRDAVGERLREHDLFDAGAPTDDRSNAWLKVLGAWGKSDGGHD 775
            GEI+PAIG +LINDS+ LRDAVGERLR         P +  SN WLK LGAWGK+D   +
Sbjct: 677  GEIYPAIGAMLINDSQSLRDAVGERLRH-------VPVNAESNLWLKALGAWGKADSRSE 729

Query: 776  NASSNSSIGGLLAGVDGLITEDTRLGFVTGYSDSSLSMGDGTHSSASVDSYHLGAYLGHE 835
             A S +S+GGLL GV+G + E TR+G V GYSDSSL+MG GTHSSAS+DSYHLGAY G E
Sbjct: 730  TAGSTTSLGGLLGGVEGALDEQTRVGLVAGYSDSSLNMGSGTHSSASIDSYHLGAYAGRE 789

Query: 836  IDALRLSVGGAYSWHRIDVKRDLQFNGVSGKQKSKRDATSAQLFTEAAYRLDLQPIALEP 895
            +   R+S GGAYSWHR DVKRDL +  VSGKQ +K DA +AQLFTEAAYR+ LQP+ALEP
Sbjct: 790  LGDWRVSAGGAYSWHRGDVKRDLHYGAVSGKQNAKLDAHTAQLFTEAAYRIHLQPLALEP 849

Query: 896  FVNLAYVHLNTESFSEKGDAAALKGGENNRDVVLSTLGLRASKAIALSDQQQLELSGTLG 955
            F NLAYVHL++E+F EKG AAAL+ G + RD VLSTLG+RA K +AL+D QQL+LSG+LG
Sbjct: 850  FANLAYVHLDSEAFHEKGAAAALERGSDRRDAVLSTLGMRALKTVALNDHQQLQLSGSLG 909

Query: 956  WQHNLSNTRSEDHLAFVNGNTAFSVQSVSMDRNAAVVGARAGLALGRDTRLNLDYNGLLG 1015
            WQH+L+   SE+HLAFV G  +F+V+S  + R+AA+VG +A LAL   TR+NLDYNG LG
Sbjct: 910  WQHSLTAIESEEHLAFVAGGPSFAVRSSPLLRDAALVGVQASLALSPVTRVNLDYNGQLG 969

Query: 1016 SREKDHGVGLTLDWQF 1031
             REK  GVGL+L+WQF
Sbjct: 970  GREKTQGVGLSLNWQF 985