Pairwise Alignments

Query, 1031 a.a., Serine protease homologue from Pseudomonas fluorescens FW300-N1B4

Subject, 1341 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  295 bits (754), Expect = 2e-83
 Identities = 232/758 (30%), Positives = 343/758 (45%), Gaps = 63/758 (8%)

Query: 314  SPDPYNISTFSSRCGYTASFCVSAPGSRIYSSII-----SGTNANDLTTGYANYNGTSMA 368
            S D YN+    +  G + +  VS  GS +    +     +G  + ++T       G S+A
Sbjct: 607  SLDAYNLYV-GNALGSSGAVLVSGVGSHVSVDGLMVVGNAGNGSVEIT------GGASLA 659

Query: 369  APHV-----AGAVAVLMERFPYMTGAQVASVLRTTATDLGAPGVDSLYGWGMIN--LRKG 421
            AP +     AG+  VL         A+ A  +   A   GA     ++        L   
Sbjct: 660  APTILIATEAGSTGVLSIGAGSGQTARSAGAVEARAIAFGAGNGSIVFNHSETGYTLSAD 719

Query: 422  IDGPAMFVTEQDIPEEFRIDGAYGSSQFVAD-LPGIGAIIDAGKPTERVCNDVHCGLD-- 478
            I G    V E  +      +   G +   A  L G      +G     + N+    +D  
Sbjct: 720  ISGAGRVVAEAGVTTLSGNNSYSGGTTISAGMLKGTAKSFGSGG----IVNNAELVVDGG 775

Query: 479  -VWRNDISGHGGLTKQGIGTLVLTGANTYAGPTLVNQGRLAINGSLLSAVTVNDSGILGG 537
                N ISG G   K G G L+LTG +TY+G T V+ G+L++NGSL SAV+V     +GG
Sbjct: 776  GTLSNAISGTGSFEKTGDGNLLLTGNSTYSGATAVSAGKLSVNGSLASAVSVGSGATVGG 835

Query: 538  NGSIAALTAKSGGTVAPGNSIGTLQVAGDVTFEPGSTYAVELSPTSSDQIIAGGKAVIEG 597
             G+I  LT  SGGT+APGNSIGTL   G+ TF  GSTYAVE+    S   +A        
Sbjct: 836  TGTIGGLTVNSGGTLAPGNSIGTLTSTGNATFASGSTYAVEIDADGSSDRLA-------- 887

Query: 598  ATVSLSLENSPTLLTT---SEAKSLLGNQYNILQAAGGIEGRFGAVVPDYLFLGGTLDYS 654
             T ++++ N  +L+ T   + +   LG +Y IL A GG+ G F +V   + +L   +  S
Sbjct: 888  VTGTITIANDVSLIVTPLGAHSAYSLGTRYTILTATGGVTGTFSSVDESFAYLTAKVAQS 947

Query: 655  A--GGIQLAVVRNATS---FTSVGQTPNQRAVAAAAEQLGAGNPLYETLLLSPTAAVAQQ 709
                   L+ +R +       +   T N RA A A E LG  +PLYE  L        Q 
Sbjct: 948  GDDATTYLSFLRTSPDSGLLAAATSTANARAAANAVEALGQTSPLYEAALFLQQGE-TQG 1006

Query: 710  AFQQLSGEIHPAIGTLLINDSRYLRDAVGERLRE-HDLFDAG---------------APT 753
            AF QL+GEIHP++   LIN S   RD +  RLR   +  DA                A  
Sbjct: 1007 AFSQLAGEIHPSLAMALINRSGQSRDVILNRLRSAFEGVDARPILPVAYAEGGQNPFAVD 1066

Query: 754  DDRSNAWLKVLGAWGKSDGGHDNASSNSSIGGLLAGVDGLITEDTRLGFVTGYSDSSLSM 813
            D   + W     + G+ D   + +S + + GG+L G+DG +++  R G   GY    +  
Sbjct: 1067 DGALSFWSSGFRSRGRIDSDGNGSSVDMNGGGILFGLDGELSDSWRAGVAAGYGHDGIKQ 1126

Query: 814  GDGTHSSASVDSYHLGAYLGHEIDALRLSVGGAYSWHRIDVKRDLQFNGVSGKQKSKRDA 873
                 +SA VDSY+L AY G +I    L +G  +++   + +R + F+ +     +    
Sbjct: 1127 -TALAASADVDSYYLAAYAGTQIGPASLRLGAIHAFQDAETRRSISFSTLQESLSASYGG 1185

Query: 874  TSAQLFTEAAYRLDLQPIALEPFVNLAYVHLNTESFSEKGDAAALKGGENNRDVVLSTLG 933
            +++Q+F EAA+R D     +EP+ N+AYV+  T+ F EKG  AA+  G    D + +T G
Sbjct: 1186 STSQVFAEAAWRFDFDLTHIEPYANIAYVNTRTDGFQEKGAIAAVSSGSTRYDQLYTTFG 1245

Query: 934  LRASKAIALSDQQQLELSGTLGWQHNLSNTRSEDHLAFVNGNTAFSVQSVSMDRNAAVVG 993
             R S+ IAL       +   L W+HN  +T     L F  G   FSV S S  R+AA++ 
Sbjct: 1246 ARISRDIALEGMLGRAMF-DLAWRHNYGDTAMGSSL-FYEGGGVFSVASTSSPRDAAILN 1303

Query: 994  ARAGLALGRDTRLNLDYNGLLGSREKDHGVGLTLDWQF 1031
                  L     L   Y  + G+   D      L  +F
Sbjct: 1304 LGLSYDLTPSATLTFRYGAVFGAGVLDQSAAAELGVRF 1341



 Score = 32.0 bits (71), Expect = 3e-04
 Identities = 80/352 (22%), Positives = 131/352 (37%), Gaps = 60/352 (17%)

Query: 494 GIGTLVLTGANTYAGPTLVNQGRLAINGSLLSAVTVNDSGI-LGGNGSIAAL----TAKS 548
           G GTLV+ G        L   G  +   S + A   ND  + +GGNG+ + L    T  S
Sbjct: 126 GDGTLVVQGGLQTNSVILGATGGSSGTASFIGANWANDGDVSVGGNGTGSLLLLHGTTAS 185

Query: 549 GGTVAPGNS---IGTLQVAGDVTFEPGSTYAVELSPTSSDQIIAGGKAVIEGATVSLS-- 603
              +  G S    G+L++    T     T     +  SS      G   + GA+   S  
Sbjct: 186 SENIYVGESGTGSGSLKLDNSSTLTVADTVFAGYNSWSSSAAGGSGNVEVLGASSLYSAN 245

Query: 604 --LENSPTLLTTSEAKSLLGNQYNILQAAGGIEGRFGAVVPDYLFLGGTLDYSAGGIQLA 661
             L N P  + T+   S  G+ +N+  ++  + G  G          GTL  + GG+ ++
Sbjct: 246 GVLANDPDTVGTA-LVSGGGSSWNM--SSDLVVGEAGV---------GTLTITGGGMVIS 293

Query: 662 ----VVRNATSFTSVGQTPNQRAVAAAAEQLGAGNPLYETLLLSPTAAVAQQAFQQLSGE 717
               V+ +  S      T ++   +  ++ L  GN     L++   A V        SGE
Sbjct: 294 QTTTVIADLNSADGSSVTVSRLGSSLQSDSLVVGNGGAAKLVVEAAATVT-------SGE 346

Query: 718 IHPAIGTLLINDSRYLRDAVGERLREHDLFDAGAPTDDRSNAWLKVLGAWGKSDGGHDNA 777
               IG    +++    D  G +    DL   G  T D            G +  G  N 
Sbjct: 347 --AIIGRHSASEATVTGD--GSKWTTGDL-QVGGDTSDPG----------GLAGNGTLNV 391

Query: 778 SSNSSIGGLLAGVDGLITEDTRLGFVTGYSDSSLSMGDGTHSSASVDSYHLG 829
           ++  S+   +A           LG V G + S++  G G+  +   +S  +G
Sbjct: 392 TAGGSVDSTVA----------HLGVVAGATGSAIVDGKGSVWTVDRNSLEVG 433