Pairwise Alignments

Query, 807 a.a., UvrD/REP helicase family protein from Pseudomonas fluorescens FW300-N1B4

Subject, 823 a.a., putative helicase, UvrD/REP family from Pseudomonas putida KT2440

 Score = 1107 bits (2863), Expect = 0.0
 Identities = 542/804 (67%), Positives = 644/804 (80%), Gaps = 3/804 (0%)

Query: 1   MPLFKRLAARFFGHGLTRLRAQHRASWLHGQADGFRSGHSAGVDYGYKEGKLEGLEEGRQ 60
           +P F+RLAAR  G GLTRL+AQHR SW  G A G R+GH+ GV  G++ G++EG E GRQ
Sbjct: 18  LPWFRRLAARLLGRGLTRLQAQHRDSWFLGHATGQRTGHADGVREGFERGRVEGFEAGRQ 77

Query: 61  VLLIRDSRSTEHRPPSVDDNLFDDWRLPLSAELKNRMKADVARLLPAHAQPSAAQWKMIF 120
           VL+IRD+R      P  DDNLFDDWRLPL+AELK R KADVA+ LPA AQPSAAQWK+IF
Sbjct: 78  VLVIRDTRPDSAAVPGQDDNLFDDWRLPLTAELKKRFKADVAQRLPAEAQPSAAQWKLIF 137

Query: 121 SDTPSTSVIAGAGAGKSTTLVLRILLLSHYLGFELSSMTVVTFTRESRKDFINKLIELFA 180
           SDTPST V+AGAGAGKST+LVLRILLL HYLG+EL +MTVVTFTRESRKDFI +L+++FA
Sbjct: 138 SDTPSTCVVAGAGAGKSTSLVLRILLLRHYLGYELDAMTVVTFTRESRKDFIKRLLQVFA 197

Query: 181 IWGRGISLKDARDLVRTFHSRILPMVRSLPGFERLQAFENLSHRVQGGDE-EVDSNPFDL 239
           +W   +    AR+LVRTFHSRILP+VRSLPGF +++AFE L H +  G E E DSNPFDL
Sbjct: 198 LWQINLQPVQARELVRTFHSRILPLVRSLPGFGQVRAFETLGHEMPAGREAEADSNPFDL 257

Query: 240 RINDAQRQQLNACYHSLHTRDERFRELIKPLSRHALQLKELERDHPDVQKRMAVTELAAK 299
           R+NDAQRQQLN CY SL     RF EL+  L   ALQLK L+ ++PDVQKR  VT+LAA+
Sbjct: 258 RLNDAQRQQLNQCYSSLLGESPRFAELVGQLRSEALQLKPLDPNNPDVQKRAQVTQLAAQ 317

Query: 300 RDEELCDTIEDLWFRAGAWPIKGIEPNRQTFDINGSTFHCHGYIPTLDAWVVLGFDPREN 359
           RDEELCD IEDLWF AG WPIKGIEP R+T DI GS FH HG +      VVLGFDP ++
Sbjct: 318 RDEELCDVIEDLWFAAGVWPIKGIEPCRETVDIRGSRFHVHGRLEGQGPLVVLGFDPAQS 377

Query: 360 PQVSRPNAKLSVRAEWAVKRTLFQAFCRKPLIWLDSYESSKRVLASLAGDASAGPGFDYK 419
            Q  RP AKL+VRAEWAVKRTL QAFC +PLIWLD+Y  ++R+ ASLAGDA AGPGF+YK
Sbjct: 378 AQYQRPGAKLTVRAEWAVKRTLLQAFCDRPLIWLDNYAMARRLAASLAGDAVAGPGFEYK 437

Query: 420 VKGELGSAPLLDCFVAAAGFIENLGLDVPNAVGQMSFAKDDPDRFFFEALSLFWRALEDH 479
           VKGEL  APLLD FV+AA FIENLGL+V NAV  MSF   D D  FFEAL+L+W+ALE H
Sbjct: 438 VKGELAPAPLLDAFVSAANFIENLGLEVNNAVAAMSFPSGDSDALFFEALALYWKALEAH 497

Query: 480 LLDQSPPVMTYNRMFALFSEHSPENLKLLSDELLRPMSHLMIDEFQDVSPQIVSWIRASL 539
           LLDQSPPVM+YNRMFALF E++PENL LL D LLRP++HLMIDEFQDVSPQIVSW+RA L
Sbjct: 498 LLDQSPPVMSYNRMFALFGENNPENLHLLPDPLLRPLAHLMIDEFQDVSPQIVSWLRACL 557

Query: 540 AEIRSRGPAMHVGRGAQRSSLLCVGDDWQSIYGWRGSSPTYFMEFNKEFPSPSTTKVMLS 599
           AEIR RGPAMH GR AQ SSLLCVGDDWQSIYGWRGSSP YFMEF K FPSP+ T+VML 
Sbjct: 558 AEIRRRGPAMHTGRHAQHSSLLCVGDDWQSIYGWRGSSPKYFMEFTKAFPSPANTRVMLV 617

Query: 600 DNYRSHQHIIDAAEHIVRAAPAIAGKKAKASGEPKAL--LPVNILDRDDQGMAQRLIEHY 657
           DNYR  Q +IDAAEH+V+  PAIAGKKA+ASG    L   PV + DRD+  + + L+EHY
Sbjct: 618 DNYRCQQQVIDAAEHLVKGTPAIAGKKARASGPAAELPGSPVKVFDRDEAALGETLVEHY 677

Query: 658 RKGDSILMLYRKSSDKSLIEEHIQSVVNVDSSLPYDARRLKQLTYHSAKGLQADAVFLLG 717
           ++G++++MLYRK SD++L+ EH+QSV++ +++LP + RRL+QLTYHSAKGLQADAVF+LG
Sbjct: 678 QRGETVMMLYRKGSDRALMNEHLQSVLHAEAALPAEQRRLRQLTYHSAKGLQADAVFMLG 737

Query: 718 DCQHLTSSPYKNQVYRMAGLGKAGDSEAYDSAQKDEILRLAYVGITRAVSHCYWYVDGQD 777
           DCQ+LTSSPYKNQVYR AGLGKAGD++ +D+AQK+E+ RLAYV +TRAV HCYW+V+  +
Sbjct: 738 DCQYLTSSPYKNQVYRQAGLGKAGDAQPFDTAQKEEVQRLAYVAVTRAVQHCYWHVEAAN 797

Query: 778 TSAANMPKASDRIGKGKAFFADHR 801
             AA  P+AS  +   +AFF D R
Sbjct: 798 GDAAAAPRASSHVDGKQAFFEDLR 821