Pairwise Alignments

Query, 807 a.a., UvrD/REP helicase family protein from Pseudomonas fluorescens FW300-N1B4

Subject, 720 a.a., DNA-dependent ATPase I and helicase II from Escherichia coli BL21

 Score = 67.8 bits (164), Expect = 2e-15
 Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 30/183 (16%)

Query: 517 SHLMIDEFQDVSPQIVSWIRASLAEIRSRGPAMHVGRGAQRSSLLCVGDDWQSIYGWRGS 576
           +++++DEFQD +    +WIR    +                  ++ VGDD QSIYGWRG+
Sbjct: 215 TNILVDEFQDTNNIQYAWIRLLAGDT---------------GKVMIVGDDDQSIYGWRGA 259

Query: 577 SPTYFMEFNKEFPSPSTTKVMLSDNYRSHQHIIDAAEHIVRAAPAIAGKKA---KASGEP 633
                  F  +FP   T  + L  NYRS  +I+ AA  ++       GKK     A GEP
Sbjct: 260 QVENIQRFLNDFPGAET--IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEP 317

Query: 634 KAL-LPVNILDRDDQGMAQRLIEHYRKGDSI---LMLYRKSSDKSLIEEHIQSVVNVDSS 689
            +L    N LD + + +  R+      G ++    +LYR ++   ++EE +     + +S
Sbjct: 318 ISLYCAFNELD-EARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL-----LQAS 371

Query: 690 LPY 692
           +PY
Sbjct: 372 MPY 374



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 16/67 (23%)

Query: 700 LTYHSAKGLQADAVFLLGDCQHLTSSPYKNQVYRMAGLGKAGDSEAYDSAQKDEILRLAY 759
           +T HSAKGL+   VF++G    +    + +Q+     L + G        + +E  RLAY
Sbjct: 557 MTLHSAKGLEFPQVFIVG----MEEGMFPSQM----SLDEGG--------RLEEERRLAY 600

Query: 760 VGITRAV 766
           VG+TRA+
Sbjct: 601 VGVTRAM 607



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 128 VIAGAGAGKSTTLVLRILLLSHYLGFELSSMTVVTFTRESRKDFINKLIELFAIWGRGIS 187
           V+AGAG+GK+  LV RI  L         S+  VTFT ++  +  +++ +L      G+ 
Sbjct: 27  VLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGM- 85

Query: 188 LKDARDLVRTFHSRILPMVRS 208
                  V TFH     ++R+
Sbjct: 86  ------WVGTFHGLAHRLLRA 100