Pairwise Alignments

Query, 690 a.a., VgrG protein from Pseudomonas fluorescens FW300-N1B4

Subject, 646 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

 Score =  325 bits (834), Expect = 3e-93
 Identities = 214/644 (33%), Positives = 325/644 (50%), Gaps = 39/644 (6%)

Query: 1   MLDANATHISLTLEGVSVDLQVLSFVGR-EALNQPFCFDIELVSARPDLKLEELLHK--S 57
           ML   A+ ++     +  D+ +L+ +G  E L + F ++++L S   ++ L +LL K  S
Sbjct: 1   MLFNQASRLAKITSPLGPDVLLLNEMGGGEELGRLFNYELQLTSLDANIDLNQLLGKPMS 60

Query: 58  GCLTFGATGQGKIHGLVYRIEQGDSGKSLTRYSISLVPQLAYLRHNHDQQIFQQLSVPKI 117
             L     G+   HG+V R  Q         Y ++L P L  L    D +IFQ LS+P+I
Sbjct: 61  VGLQLADGGERHFHGIVARCSQNIDQGQFASYQVTLRPWLWLLSRTSDCRIFQNLSIPQI 120

Query: 118 IAQVLEARGILADAYSFQLGAIYPERVYCVQYDESDLHFIQRLCEEEGIHFHFQHSTSGH 177
           I QV    G     +   L   Y E  YCVQY E+   F+ RL E+EGI++ F+H    H
Sbjct: 121 IKQVFRDLGF--SDFEDALSRPYREWEYCVQYRETSFDFVSRLMEQEGIYYFFRHEQDRH 178

Query: 178 KLVFGDD---QTVFRKLAPVSYQQDSGMAAKKPVIKRFNLRLETRTTRVSRRDYDFEKPR 234
            LV  D     T     A + Y        ++  +  ++L  E +   +   DYDF++P 
Sbjct: 179 VLVLADAYGAHTTVPGYASIPYYPKDEQQRERDHMHNWHLAHEVQPGSMELNDYDFQRPS 238

Query: 235 L---LPEGAAKSAFAPDLEDYDYPGRFIDRARGKQLATRALERHRSDYQLAEGKGDEPTL 291
               +     +   A D   YDYPG ++    G+  A   +E  ++ ++  E  G+   L
Sbjct: 239 ASIDVRSAMPRPHTAGDYPLYDYPGTYVQSEDGEHYARTRIEALQTLHEQIEFNGNARGL 298

Query: 292 VSGHFMALSEHPRAEWNDLWLLLEIVHEGKQPQVLGENITSDVTHNKDDFHQGYRNRFLA 351
            SGH  +L+   R + N  +L++     G +  ++ E++ S        F          
Sbjct: 299 GSGHLFSLTGFSRQDQNREYLIV-----GCRYYIVQESLESGGGSGSAQFESSL------ 347

Query: 352 TPWDAH--YRPALEHPKPKVLGSQTAIVTGPAGEEIHCDEYGRVKVQFHWDRDGQGHDTS 409
           T  DA   +RP     +P V G QTA+V GP GEEI  D+YGRVKV F+WDR  Q ++ S
Sbjct: 348 TCIDAQQSFRPLANTHRPIVKGPQTALVVGPKGEEIWTDQYGRVKVHFYWDRHDQSNENS 407

Query: 410 SCWLRVATGWAGNAYGGIAIPRIGMEVLVTFLEGDPDQPLITGCLYHKENVVPYDLPANK 469
           SCW+RV+  WAG  +G + IPRIG EV+V+FLEGDPD+P+ITG +Y+ E  VPYDLP N 
Sbjct: 408 SCWIRVSQSWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDLPENA 467

Query: 470 TRSTFKTLSSPGGK--GYNEFRIEDKKGAEQIYLHAQRDWDENIEHDQKIRIGNERHDTV 527
           T+S  K+ SS GG    +NE R+EDKKG EQ+Y+HA+R+ D  +E D+   +G++R+ ++
Sbjct: 468 TQSGMKSRSSKGGSPANFNEIRMEDKKGLEQLYIHAERNQDIVVEVDESHSVGHDRNKSI 527

Query: 528 EANAFSEFKVEEHRLTHLDRTTEARADDHLTVGVTRHVKVGTAQFVEAGTEIHYHAGEKV 587
             N        E      +R    + +D L+VG  +   +  +  +E G  +    GE +
Sbjct: 528 GHN--------ETVTIGNNRLRIVKQEDILSVGQKKTDSISQSYVIEVGENLRLVCGESI 579

Query: 588 V---VEGGMELTAKAGGSFVKIDAGGVTISGAEVKVNSGGAPGA 628
           +     G + LT      +   DA   T  G  + +N+GG PGA
Sbjct: 580 LELNASGQINLTGVQISFYASGDAEFNT--GGVLHLNNGGGPGA 621