Pairwise Alignments

Query, 685 a.a., Carbon starvation protein A from Pseudomonas fluorescens FW300-N1B4

Subject, 716 a.a., putative carbon starvation protein (VIMSS) from Escherichia coli BW25113

 Score =  978 bits (2527), Expect = 0.0
 Identities = 481/705 (68%), Positives = 580/705 (82%), Gaps = 25/705 (3%)

Query: 3   RLAKHLAWFAVAVLGAFALSVVALRRGEAINALWIVVAAVAIYLVAYRYYSLFIATKVMQ 62
           ++ KH+ W  + ++GAF L+VVALRRGE I+ALWIVVA+V++YLVAYRYYSL+IA KVM+
Sbjct: 5   KIFKHIPWVILGIIGAFCLAVVALRRGEHISALWIVVASVSVYLVAYRYYSLYIAQKVMK 64

Query: 63  LDPNRATPAVLNNDGLDYVPTNKHVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLIA 122
           LDP RATPAV+NNDGL+YVPTN++VLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWL+A
Sbjct: 65  LDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLA 124

Query: 123 GVVLAGAVQDFMVLFMSTRRNGRSLGDMVREEMGRIPGTIALFGCFLIMIIILAVLALIV 182
           GVVLAGAVQDFMVLF+S+RRNG SLG+M++EEMG +PGTIALFGCFLIMIIILAVLALIV
Sbjct: 125 GVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPVPGTIALFGCFLIMIIILAVLALIV 184

Query: 183 VKALAESPWGMFTVMATIPIAMFMGIYMRYIRPGRIGEISVIGVALLLGSIWLGGQIAAD 242
           VKALAESPWG+FTV +T+PIA+FMGIYMR+IRPGR+GE+SVIG+ LL+ SI+ GG IA D
Sbjct: 185 VKALAESPWGVFTVCSTVPIALFMGIYMRFIRPGRVGEVSVIGIVLLVASIYFGGVIAHD 244

Query: 243 PVWAKAFTFTGIQITWMLIGYGFVAAVLPVWLILAPRDYLSTFLKIGTIVALAIGILITM 302
           P W  A TF    IT+ LIGY FV+A+LPVWLILAPRDYL+TFLKIG IV LA+GI++  
Sbjct: 245 PYWGPALTFKDTTITFALIGYAFVSALLPVWLILAPRDYLATFLKIGVIVGLALGIVVLN 304

Query: 303 PDLKMPALTQFIDGTGPVWKGGLFPFLFITIACGAVSGFHSLIASGTTPKLLASEGHARY 362
           P+LKMPA+TQ+IDGTGP+WKG LFPFLFITIACGAVSGFH+LI+SGTTPKLLA+E  AR+
Sbjct: 305 PELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALISSGTTPKLLANETDARF 364

Query: 363 IGYGGMLMESFVAIMAMVAASVIEPGVYFAMNSPAALVGAD------------------- 403
           IGYG MLMESFVAIMA+VAAS+IEPG+YFAMN+P A +G                     
Sbjct: 365 IGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHEMGGENAPIIMAQL 424

Query: 404 ---AVSVAQTVSSWGFAITPEALQAVAKDIGEATILARAGGAPTLAVGIAQILHQLLPGE 460
                  A TVSSWGF I+PE +   AKDIGE ++L RAGGAPTLAVGIA + H++LP  
Sbjct: 425 KDVTAHAAATVSSWGFVISPEQILQTAKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMA 484

Query: 461 NTMAFWYHFAILFEALFILTAVDAGTRAGRFMLQDLLGSFVPALKRTESWTANLIATAGC 520
           + M FWYHF ILFEALFILTA+DAGTR+GRFMLQDLLG+F+P LK+T+S  A +I TAGC
Sbjct: 485 D-MGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGC 543

Query: 521 VAMWGYLLYQGVIDPLGGINTLWPLFGISNQMLAGIALMLATVVLIKMKRQRYVWVTMLP 580
           V +WGYLLYQGV+DPLGG+ +LWPLFGISNQMLA +AL+L TVVLIKMKR +Y+WVT++P
Sbjct: 544 VGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVP 603

Query: 581 AVWLLICTTTAGFIKLFDANPAI-GFLALAKKYSDALANGQVLAPAKSIEQMQHVIYNAY 639
           AVWLLICTT A  +KLF  NP + GF  +A +Y + +ANG  L  A+ I  M H++ N Y
Sbjct: 604 AVWLLICTTWALGLKLFSTNPQMEGFFYMASQYKEKIANGTDLT-AQQIANMNHIVVNNY 662

Query: 640 TNATLTALFLLVVFSILFFALKVGIAAWGTKERTDKEAPFQALPD 684
           TNA L+ LFL+VV+SI+F+  K  +A   + +RTDKE P+  +P+
Sbjct: 663 TNAGLSILFLIVVYSIIFYGFKTWLAVRNSDKRTDKETPYVPIPE 707