Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 9e-34
 Identities = 104/343 (30%), Positives = 159/343 (46%), Gaps = 32/343 (9%)

Query: 9   TEAPSPKASEPAADPAKKGIKWVLLLIVLSL-------AWYLLADRFTPYTQQARVGAFV 61
           T+ P+P     A +P++K   W+L L++L +       AWY +  R+   T  A V   V
Sbjct: 5   TDTPTPSV---APEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNV 61

Query: 62  IPVASEVAGRVIRVDVRNNQDVKAGDVLFEVDQQPYQIAVDRARADLESTRRQIGASTAG 121
           + +   VAG V  +   +   V AG VL + D    ++A+  A A L  + RQ+    + 
Sbjct: 62  VEITPLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSN 121

Query: 122 IASAQANLRAAQANELKARQDNQRLEGLYREDPGTISVRLLEVSRANREQAVSQVAAAHA 181
           + S +A L   QA   KA+QD  R + L   D G I+    E+S A  + +V+Q A    
Sbjct: 122 VDSLKAQLETRQAELRKAQQDFNRRKVL--ADSGAIAAE--ELSHARDDLSVAQAA---- 173

Query: 182 EVQRAREQEGGSEE--DNALLRS------AATALSKAELDLSNTQIRARSAGLITDLRTD 233
            V  AR+Q   S    D+ ++ S      AA  L +A LD + T + A   G +      
Sbjct: 174 -VNSARQQLSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQ 232

Query: 234 VGQFATAGSPVMTLIAIHDVWISADMTENNLGLVEVGTPVSIVLDAMPGKV-FEGRVRSV 292
           +GQ    G+  M +I +  VWI A+  E  L  + +G PV I  D    +V + G V S+
Sbjct: 233 LGQRLQPGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSL 292

Query: 293 GYGVSVGQSTAPGSLPSVQNSRDWLRPAQRFPVIIEFSEDSRK 335
           G     G  +A   LP+   + +W++  QR PV I  S D  K
Sbjct: 293 G----AGTGSAFALLPAQNATGNWIKIVQRVPVRIHLSPDQLK 331