Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 343 a.a., predicted membrane fusion protein of efflux pump (NCBI) from Escherichia coli BW25113

 Score =  148 bits (373), Expect = 3e-40
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 10/305 (3%)

Query: 31  VLLLIVLSLAWYLLADRFTPYTQQARVGAFVIPVASEVAGRVIRVDVRNNQDVKAGDVLF 90
           V+ L +++L + +      P T  A   A  I V  EV+GR++ + V +NQ VK GD+LF
Sbjct: 18  VVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLF 77

Query: 91  EVDQQPYQIAVDRARADLES-------TRRQIGASTAGIASAQANLRAAQANELKARQDN 143
            +D +PY+  + +A A L +       T+R + A   G  S  A +  A+A   +A    
Sbjct: 78  RIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQATDTL 137

Query: 144 QRLEGLYREDPGTISVRLLEVSRANREQAVSQVAAAHAEVQRAREQEGGSEEDNALLRSA 203
           +R E L +E  G +S   ++ +R  +  A + + A   + Q A     G +   A   + 
Sbjct: 138 RRTEPLLKE--GFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVAQRAAV 195

Query: 204 ATALSKAELDLSNTQIRARSAGLITDLRTDVGQFATAGSPVMTLIAIHDVWISADMTENN 263
              ++  +L L    +RA   G +  L+T VGQFA+A  P+ TLI     ++ A+  E +
Sbjct: 196 EADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETD 255

Query: 264 LGLVEVGTPVSIVLDAMPGKVFEGRVRSVGYGVSVGQ-STAPGSLPSVQNSRDWLRPAQR 322
           L  +  GTP +I L +  GK FEG+V S+GYGV         G LP V  S +W+R AQR
Sbjct: 256 LKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQR 315

Query: 323 FPVII 327
           FPV I
Sbjct: 316 FPVKI 320