Pairwise Alignments

Query, 379 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 378 a.a., membrane fusion protein (MFP) component of efflux pump, signal anchor (NCBI) from Escherichia coli BW25113

 Score =  111 bits (277), Expect = 4e-29
 Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 12/340 (3%)

Query: 43  LLADRFTPYTQQARVGAFVIPVASEVAGRVIRVDVRNNQDVKAGDVLFEVDQQPYQIAVD 102
           LL +   PYT +A+     IPV  +V G VI V  + N  +K G+VLF +D   YQ  VD
Sbjct: 45  LLMNYNHPYTFKAQKAVISIPVVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVD 104

Query: 103 RARADLESTRRQIGASTAGIASAQANLRAAQANELKARQDNQRLEGLYREDPGTISVRLL 162
           R  AD+ +   +  A  A +    AN + A+A   K  ++ QR     +      S R +
Sbjct: 105 RLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDI 164

Query: 163 EVSRANREQAVSQVAAAHAEVQRAREQ-EGGSEEDNALLRSAATALSKAELDLSNTQIRA 221
           +V+R N     + V ++ AE ++ + Q +     +++ + S    L++A+ +L  T +RA
Sbjct: 165 DVARQNYLAQEASVKSSAAEQKQIQSQLDSLVLGEHSQIASLKAQLAEAKYNLEQTIVRA 224

Query: 222 RSAGLITDLRTDVGQFATA--GSPVMTLIAIHDVWISADMTENNLGLVEVGTPVSIVLDA 279
            S G +T +    G +A +    PVM  I      I A   +N+L  +  G    +V +A
Sbjct: 225 PSDGYVTQVLIRPGTYAASLPLRPVMVFIPDQKRQIVAQFRQNSLLRLAPGDDAEVVFNA 284

Query: 280 MPGKVFEGRVRSVGYGVSVGQSTAPGSLPSVQNSRDWLRPAQRFPVIIEFSEDSRKTLFA 339
           +PGKVF G++ ++   V  G   + G+L ++  +     P     VI     D    L  
Sbjct: 285 LPGKVFSGKLAAISPAVPGGAYQSTGTLQTLNTA-----PGSD-GVIATIELDEHTDL-- 336

Query: 340 SRAIRAGGQAEVMAFPTQDNPLNLLGRLFVGLMSWLSYAY 379
             A+  G  A+V  +    + ++++ ++ + + SW+ Y Y
Sbjct: 337 -SALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWVHYLY 375