Pairwise Alignments

Query, 323 a.a., Site-specific recombinase, phage integrase family from Pseudomonas fluorescens FW300-N1B4

Subject, 298 a.a., site-specific tyrosine recombinase XerC (NCBI) from Escherichia coli BW25113

 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 31/250 (12%)

Query: 66  WHQLQPEDVVALVATLREDGYAPNTSSLYVNAVRGVMNEAWRMSLISQEHLLKMRSVKGI 125
           W Q     V       R  G    + +L ++A+R   +  W   L+SQ  L K    KG+
Sbjct: 48  WQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFD--W---LVSQNEL-KANPAKGV 101

Query: 126 AGTRLSQG--RNLKRTLIRDLMEVCAADPRPQGLRDAAIIGILYGSGMRKSESVNLDLAQ 183
           +  +  +   +N+    +  L+++   DP    +RD A++ ++YG+G+R SE V LD+  
Sbjct: 102 SAPKAPRHLPKNIDVDDMNRLLDIDINDPL--AVRDRAMLEVMYGAGLRLSELVGLDIKH 159

Query: 184 VDFTERSLCVTAKGNKQLIKYAPAWAFAKLDAWLELRRSQLKEGETDDPFLFNRIRRGSH 243
           +D     + V  KG+K+        A A ++ WL+LR      G  DD    +++  G  
Sbjct: 160 LDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRD---LFGSEDDALFLSKL--GKR 214

Query: 244 ITRERITKHAIYYIARQRGAQVGVK------IMPHDFRRSFITRVIEEH-DLSIAQKLAH 296
           I+   + K         R A+ G+K      + PH  R SF T ++E   DL   Q+L  
Sbjct: 215 ISARNVQK---------RFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLG 265

Query: 297 HSNIQTTANY 306
           H+N+ TT  Y
Sbjct: 266 HANLSTTQIY 275