Pairwise Alignments

Query, 392 a.a., Multidrug resistance protein B from Pseudomonas fluorescens FW300-N1B4

Subject, 395 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  207 bits (528), Expect = 3e-58
 Identities = 118/382 (30%), Positives = 207/382 (54%), Gaps = 14/382 (3%)

Query: 11  LMIVSLTIVVSRAITSPLLTLFLSNKLGLNQQDVGLLLGIAVFIATLLALYGGYIIDRLE 70
           L+  SL + + R  T P +T++LS +  L+   +G  + IA+ I  + +L  G + D+ +
Sbjct: 12  LLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFD 71

Query: 71  KRRLLILTMLSSAIGFVLLTFAENLYLTTATLVITETASALFLIGSKAILSENLPVGQRA 130
           K+R ++L + + A GF+ +T   N+ L      +   A ++F    KA  ++NL    + 
Sbjct: 72  KKRYMLLAITAFASGFIAITLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKT 131

Query: 131 KAFSLRYTLTNIGYATGPMLGVVIAGVQPLAPFLIAG-GIAFFSIFLMSGIPKD----PA 185
           K FS+ YT+ NIG+  GP LG ++       PF +A    AF  +F+   + +       
Sbjct: 132 KIFSINYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQIWVKRSEKIIAT 191

Query: 186 QTPAIGQPQSFLKTLITLKNDRTLIMFTCGCLLSTVVHGRFTLYLSQYLLVTQDTKRALE 245
           +T ++  P+  L+       D+ L+ FTC   L++ V G F   +SQY++V  D   A +
Sbjct: 192 ETGSVWSPKVLLQ-------DKALLWFTCSGFLASFVSGAFASCISQYVMVIADGDFAEK 244

Query: 246 TMAALLACNAISVILLQYQIGRFLKREQLRYWIAGGTSLFILGLIGFSLA-DSLVSWCVA 304
            +A +L  NA  V+ LQY +GR L    +R  +  GT  F++GL+GF  + +SL+ W ++
Sbjct: 245 VVAVVLPVNAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLLWGMS 304

Query: 305 MFIFTLGEMIIYPAEFLFVDTLAPEELRGSYYGAQNLAALGGALSPVICGYLLLHTPAPT 364
             +FT+GE+I  P E++ +D +AP E++ SY+ AQ+L  LG A++P++ G +L   P P+
Sbjct: 305 AAVFTVGEIIYAPGEYMLIDHIAPPEMKASYFSAQSLGWLGAAINPLVSGVVLTSLP-PS 363

Query: 365 MFYALSALTAMGGLLCFMSGRR 386
             + + AL  +   +  + G R
Sbjct: 364 SLFVILALVIIAAWVLMLKGIR 385