Pairwise Alignments

Query, 297 a.a., Transcriptional regulators, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 311 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score =  108 bits (271), Expect = 1e-28
 Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 8/286 (2%)

Query: 1   MRLRHIEVIQALLQTGHLGTAAEWLQLPVAEVERTLRDAEDQLGFMLFASVRGRLQATRE 60
           + LRHIE+  A++  G L  AA  L      V R L   E  +G  LF  VRGRL  T +
Sbjct: 4   VNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQ 63

Query: 61  ARELQVEIAHVYEALEPVQRLASSLKQYLAPPLRIICTPPLAQHLLPHSIAALRRRLPDA 120
              L  E+   +  L+ +   A SL+++    L I C P  +Q  LP  +     R PD 
Sbjct: 64  GLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDV 123

Query: 121 PCTLLSQPTGAIVRSLLLRESDLGL--SLHDPEHADIHCQVIAQGKLQLLAPHGWLQPKQ 178
              ++ Q +  +   L  +  DLGL  +LH P   +   ++++  ++ +L P   L  K 
Sbjct: 124 SLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTE-RTELLSLDEVCVLPPGHPLAVK- 181

Query: 179 KYISLQDLAGQSMVGLEGHDPLSPALDNKL--HALRPAPVIQTRVQTHQMMRSMVEAGEG 236
           K ++  D  G++ + L   D     LD     H ++   +++T   +   + +MV AG G
Sbjct: 182 KVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVET--HSAASVCAMVRAGVG 239

Query: 237 LAIVDPFTALGAKSAGLDACPLAPAVPISVYALSLKSAEPSAAVQA 282
           +++V+P TAL   ++GL     + AVP +V  +       SA VQA
Sbjct: 240 ISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQA 285