Pairwise Alignments

Query, 357 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 355 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  408 bits (1048), Expect = e-118
 Identities = 195/353 (55%), Positives = 264/353 (74%), Gaps = 8/353 (2%)

Query: 1   MLAYIFRRLLLIIPTLLGILLINFVIIQAAPGGPVEQMIAKLEGFEGATSRIAGGGAEVS 60
           M AYI +RLLL+IPTL+G++++ F +IQ  PGGPVEQ + +           AGGG    
Sbjct: 11  MTAYILKRLLLMIPTLIGVVVLTFGVIQFVPGGPVEQYVMESRAASMGPGGEAGGG---- 66

Query: 61  VAGSAYRGAQGLDPALVKEIEHMYGFDKSAPERLWIMIKNYATLDFGDSFFRDAKVIDLI 120
             G  YRG+QG+DP  ++EI+ +YGFD    +RL  M+  +A  D G+SFF++  V  LI
Sbjct: 67  --GGGYRGSQGVDPKRLEEIKKLYGFDLPPLQRLTQMLGRFARFDLGNSFFQNKTVWQLI 124

Query: 121 KEKLPVSISLGLWSTLIMYLVSIPLGIAKATRHGSHFDVWTSSAIIVGYAIPAFLFAILL 180
            EKLPVS+SLGLW+  I Y +++PLG+AKA R GS FD+W++  ++VGYAIP F+  ++L
Sbjct: 125 VEKLPVSMSLGLWTFFISYAIAVPLGVAKAVRAGSRFDLWSTLLVLVGYAIPGFVLGVVL 184

Query: 181 IVVFAGGSYFDWFPLRGLTSNNFDELSTGGKILDYFWHLALPVTALVIGNFATMTLLTKN 240
           +VVF G     WFPLRGLTS++++ LS G +I+DY WH+ALPVTA+V+G+FA  T+LTKN
Sbjct: 185 LVVFGG--QLQWFPLRGLTSSDWESLSWGARIVDYLWHIALPVTAMVLGSFAVTTMLTKN 242

Query: 241 SFLDEINKQYVVTAKAKGLTRHRVLYGHVFRNAMLLVIAGFPSAFIGIFFTGSLLVEVIF 300
           +FL+EI KQYV+TA+AKGL+  +VL+ HVFRNA++ ++ GFP AFIG FFTG+LL+E +F
Sbjct: 243 AFLEEIRKQYVMTARAKGLSERQVLWKHVFRNALIPIVTGFPQAFIGAFFTGALLIETLF 302

Query: 301 SLDGLGLMSFEAAINRDYPVVFGTLFIFTLLGLVVKLIGDLTYTFVDPRIDFE 353
           SLDGLGL+S+E+ I RDYPVV GTLF FTL+ LV KLI DL Y +VDPR+ F+
Sbjct: 303 SLDGLGLLSYESVIRRDYPVVIGTLFFFTLIALVTKLIADLCYVWVDPRVKFD 355