Pairwise Alignments

Query, 394 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 397 a.a., putative ABC transporter, substrate-binding protein from Pseudomonas putida KT2440

 Score =  627 bits (1617), Expect = 0.0
 Identities = 312/397 (78%), Positives = 348/397 (87%), Gaps = 5/397 (1%)

Query: 1   MRQLAPYALIYLLAIACAAGV----ATQTQAADAPLQVQIGYLGYRPDPGPLLSNVIPEP 56
           MRQ A  AL  LLA+A         A Q QAA APL ++IGYLGYRP  GPLLSN+IPEP
Sbjct: 1   MRQPAHLALTCLLALAATLATPLAPAAQGQAA-APLHIRIGYLGYRPAAGPLLSNIIPEP 59

Query: 57  TDAGLRGAELAITDSNSTGRFLNHSYSLVSASVDNPDALIEAAKAQYEQGLRLFVVNAPA 116
            DAGL+GAELAI DSNSTGRFL   + L SA+VD+P+AL++AA+AQ++QGLR+FVVNAPA
Sbjct: 60  GDAGLQGAELAIVDSNSTGRFLKQQFQLTSANVDSPEALLQAARAQHDQGLRVFVVNAPA 119

Query: 117 QTLRRLSAVLPDSLLFNAGSPDDSLRNTDCLPNVLHSLPSRAMLADALAQFLVLRKWQRA 176
            +LR LSA LPDSLLFNAGSPDDSLR++ CL NVLHSLPSRAMLADALAQFLVLRKWQRA
Sbjct: 120 ASLRALSAALPDSLLFNAGSPDDSLRSSQCLGNVLHSLPSRAMLADALAQFLVLRKWQRA 179

Query: 177 LLIVGPTADDQAYAAALRRAAKRFGLQLVAEKAWSFDNDQRRSAQADMPLFTQTAEYDVV 236
           LL+VG T DDQAYAAALRR+ KRFG+QLVAEK W+FDNDQRRSAQADMPLFTQTAEYDVV
Sbjct: 180 LLVVGQTPDDQAYAAALRRSVKRFGVQLVAEKTWTFDNDQRRSAQADMPLFTQTAEYDVV 239

Query: 237 LVADERGDFGEYVPYQTWYPRPVAGTQGLTPVGWHKTVETYGAAQLQKRFEALAGRWMND 296
           LVADERGDFGEY+PYQTWYPRPVAGTQGLTP GWHKTVET+GAAQLQKRFEA AGRWMND
Sbjct: 240 LVADERGDFGEYLPYQTWYPRPVAGTQGLTPTGWHKTVETFGAAQLQKRFEAQAGRWMND 299

Query: 297 RDFAAWIAVRSIASAVGKLRQTDAMAIRTLEVSDQLPLDGFKGRKLSYRPWNGQLRQPIP 356
           RDFAAW+AVRS+ASA  KLR  +  A++ L +S+QLPLDGFKGRKLSYRPWNG+LRQPIP
Sbjct: 300 RDFAAWMAVRSVASAASKLRLAEPRALQQLLLSEQLPLDGFKGRKLSYRPWNGELRQPIP 359

Query: 357 IVQPRALVSTSPQDGFLHPVNEMDSLGYDKAEVSCRF 393
           +VQPRALVSTSPQ+GFLHP NEMDSLGYDK EV+C +
Sbjct: 360 LVQPRALVSTSPQEGFLHPFNEMDSLGYDKPEVTCSY 396