Pairwise Alignments

Query, 417 a.a., Probable porin from Pseudomonas fluorescens FW300-N1B4

Subject, 418 a.a., outer membrane porin from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  297 bits (761), Expect = 3e-85
 Identities = 162/398 (40%), Positives = 232/398 (58%), Gaps = 13/398 (3%)

Query: 24  ASDFIDDSKLKLQLRNVYFNENFRDEHGLSARSARTAKSERAEWAQGFLLDFQSGFTPGT 83
           ++ F++D+K+ L LRN Y N NF D           A++   EW Q F+LD +SGFT GT
Sbjct: 28  SAGFVEDAKVNLNLRNFYINRNFVDP--------ANAQNYAEEWTQNFILDARSGFTQGT 79

Query: 84  IGFGVDALGLLGVKLDSGRGRSGTGLLPVHDDGRAADEFASAGAAAKVKLAKTTLKYGTL 143
           +GFGVDALGL  +KLD G+G  GT LLP+H DGR AD+F     A K + +KT LK G  
Sbjct: 80  VGFGVDALGLYSLKLDGGKGTGGTQLLPIHGDGRPADDFGRLAVAGKARFSKTELKVGEW 139

Query: 144 LPKTPVLIYNDARLLPQTYEGGQVSSTDIENLTLTGGHLDRFKLRDSTDSVSIVPDGYSG 203
           +P  P+L  +D R LPQT++GGQ++S +I+ LTL GG       R+      +  +G + 
Sbjct: 140 MPVLPILRSDDGRSLPQTFQGGQITSKEIDGLTLYGGQFRGNSPRNDASMEDMSLNGRTA 199

Query: 204 DKGGDFTYAGGDYKLGKN-TRLSYFYGELENFYRQNFAGLQHDLPLGPGVLTGDLRYFSS 262
                F + GG+Y   +N T++  +Y ELE+ Y Q +  L H  PLG   L  +L YF  
Sbjct: 200 FTSDRFNFGGGEYVFNQNRTQVGVWYAELEDIYHQQYFNLLHSQPLGSWTLGANLGYFQG 259

Query: 263 NDAGRAYASKIDNDMLSGQLSYAVAGHTFGGGYQQLSGDAGLPYISGATVYSFSNVGI-G 321
            D G++ A  +DN   S  LS    G+TF  G Q++SGD+    ++G +  + +N     
Sbjct: 260 KDDGQSLAGDLDNKTWSALLSARHGGNTFYLGLQKVSGDSAWMRVNGTSGGTLANDSYNS 319

Query: 322 KFIEEDEKTWMLSYGYDFAPVGVPGLTFMTRYLKGNDGKSD--TNIKESERDTELAYVVQ 379
            F    EK+W L + YDFA +GVPGLT M RY+ G++  +   T+ +E  R+TELAYV Q
Sbjct: 320 SFDNAREKSWQLRHDYDFAALGVPGLTLMNRYISGDNVHTGAITDGEEWARETELAYVFQ 379

Query: 380 SGTFKGVGVKLRNYVYRSDFARGR-DSNRIYVTYDIAL 416
           +G FK + VK RN   R D++  + D NR+ V+Y ++L
Sbjct: 380 NGAFKSLSVKWRNSTMRRDYSTNQFDENRLIVSYPLSL 417