Pairwise Alignments

Query, 417 a.a., Probable porin from Pseudomonas fluorescens FW300-N1B4

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  289 bits (739), Expect = 1e-82
 Identities = 163/401 (40%), Positives = 227/401 (56%), Gaps = 12/401 (2%)

Query: 20  ATAGASDFIDDSKLKLQLRNVYFNENFRDEHGLSARSARTAKSERAEWAQGFLLDFQSGF 79
           A A    F++D+K  L LRN YFN +FRD           AK +  EWAQGF+  F SG+
Sbjct: 25  AWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGA--------AKGKVEEWAQGFIFKFSSGY 76

Query: 80  TPGTIGFGVDALGLLGVKLDSGRGRSGTGLLPVHDDGRAADEFASAGAAAKVKLAKTTLK 139
           TPG IGFG+D + L GVKLDSG G SG+ LLPVHDDGRAAD++  AG AAK++++ T LK
Sbjct: 77  TPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATELK 136

Query: 140 YGTLLPKTPVLIYNDARLLPQTYEGGQVSSTDIENLTLTGGHLDRFKLRDSTDSVSIVPD 199
            G LLP  P+L Y+D RLLPQT+ G  + S +IE L+L  G      LR S+D   +   
Sbjct: 137 VGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLSAW 196

Query: 200 GYSGDKGGDFTYAGGDYKLG-KNTRLSYFYGELENFYRQNFAGLQHDLPLGPGVLTGDLR 258
              G     F YAG +Y+   + T +  ++ +LE+ Y+Q++  L H   +G   L  +L 
Sbjct: 197 AAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEWTLGANLG 256

Query: 259 YFSSNDAGRAYASKIDNDMLSGQLSYAVAGHTFGGGYQQLSGDAGLPYISGATVYSFSN- 317
           YF   D G+A    I +      LS + +GHT   G Q++SGD+    + G++  +  N 
Sbjct: 257 YFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGND 316

Query: 318 VGIGKFIEEDEKTWMLSYGYDFAPVGVPGLTFMTRYLKGNDG--KSDTNIKESERDTELA 375
           +  G F   DE++W + Y Y+FA +GVPGL  M RY  G +    + +N KE ERD E+ 
Sbjct: 317 MFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGKEWERDAEVN 376

Query: 376 YVVQSGTFKGVGVKLRNYVYRSDFARGRDSNRIYVTYDIAL 416
           Y  QSG  K + ++L N   R  F    D  R+ V+Y + L
Sbjct: 377 YTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSYPLTL 417