Pairwise Alignments

Query, 254 a.a., Arginine/ornithine ABC transporter, ATP-binding protein AotP from Pseudomonas fluorescens FW300-N1B4

Subject, 254 a.a., amino acid transporter from Pseudomonas simiae WCS417

 Score =  347 bits (890), Expect = e-100
 Identities = 172/255 (67%), Positives = 220/255 (86%), Gaps = 2/255 (0%)

Query: 1   MYKLEVQDLHKSYGAHQVLKGVSLQAQAGDVISIIGSSGSGKSTFLRCINLLEQPNAGNI 60
           MYKL V+ LHKSYG ++VLKGVSL+A+ GDVIS+IG+SGSGKSTFLRCIN LE PN G +
Sbjct: 1   MYKLTVEGLHKSYGDNEVLKGVSLKAKTGDVISLIGASGSGKSTFLRCINFLETPNDGAM 60

Query: 61  VLNGEPLKLVANKLGGLKAAEPKQLQRMRSQLSMVFQHFNLWSHMSALENVMEAPVHVQG 120
            L+G+P+++V+++  G++ A+  +LQR+R++L+MVFQHFNLWSHMS LEN+  AP  V G
Sbjct: 61  TLDGQPIRMVSDR-HGMRVADDAELQRLRTRLAMVFQHFNLWSHMSVLENITMAPRRVLG 119

Query: 121 LGKKEAREKAEHYLDKVGVAHRM-NAWPAHMSGGEQQRVAIARALAMEPQVMLFDEPTSA 179
             KK+A ++A  YLDKVG+  R+ + +PA +SGG+QQRVAIARALAMEP+VMLFDEPTSA
Sbjct: 120 CSKKDAEDRARRYLDKVGLPARVADQYPAFLSGGQQQRVAIARALAMEPEVMLFDEPTSA 179

Query: 180 LDPELVGEVLKVMQDLAQEGRTMVVVTHEMGFAREVSNQLVFLHKGVVEERGDPSEVLVN 239
           LDPELVGEVLKV+Q LA+EGRTM++VTHEM FAR+VS+Q++FLH+G+VEE+G P EVL N
Sbjct: 180 LDPELVGEVLKVIQGLAEEGRTMIMVTHEMSFARKVSSQVLFLHQGLVEEQGPPEEVLGN 239

Query: 240 PQSERLQQFLSGSLK 254
           P+SERLQQFLSG+LK
Sbjct: 240 PKSERLQQFLSGNLK 254