Pairwise Alignments

Query, 400 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score =  574 bits (1479), Expect = e-168
 Identities = 292/400 (73%), Positives = 340/400 (85%), Gaps = 3/400 (0%)

Query: 1   MATVDTSQAPDNAQDTSNLRKRKVMLFALTIVVILAGLGVWGYQEFYGRWNESTDDAYVN 60
           MAT   +  P  A + S  RKRK  L  L +++ILAG+G W +    GRW+ESTDDAYVN
Sbjct: 1   MATPTDTPTPSVAPEPS--RKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVN 58

Query: 61  GNVVEITPLVTGTVVSIGADDGDLVHEGQVLVNFDPNDAEVGLQSAQANLARTVRQVRGL 120
           GNVVEITPLV GTV SIGADDGDLVH GQVL+ FDP D+EV LQSA+A LAR+VRQVRGL
Sbjct: 59  GNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGL 118

Query: 121 YSNVDGMKAQVNAQQAEVQKAQDNFNRRKNLAAGGAISQEELSHARDDLTSAQNALANAK 180
           YSNVD +KAQ+  +QAE++KAQ +FNRRK LA  GAI+ EELSHARDDL+ AQ A+ +A+
Sbjct: 119 YSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSAR 178

Query: 181 QQLMTTSALVDDTVVSSHPDVMSAAAQLRQAYLTHARSTLIAPVTGYVAKRSVQLGQRVQ 240
           QQL T+SALVDDTVVSSHPDVM+AAA LRQAYL HAR+TL+APVTGYVAKR+VQLGQR+Q
Sbjct: 179 QQLSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQ 238

Query: 241 PGTALMAVIPLDQLWIDANFKETQLRDMRIGQPVDIEADLYGSDVKYSGTIDSLGAGTGS 300
           PGTA MAVIPLDQ+WIDANFKETQLR+MRIGQPV+I AD+YGS+VKYSGT+DSLGAGTGS
Sbjct: 239 PGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGS 298

Query: 301 AFALLPAQNATGNWIKIVQRVPVRIHINAEELARHPLRVGLSTQVDVNLRDQSGPVLAQQ 360
           AFALLPAQNATGNWIKIVQRVPVRIH++ ++L  HPLR+GLST V+V+L DQSGP LAQQ
Sbjct: 299 AFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQSGPTLAQQ 358

Query: 361 SPQKASFSTSIYDRQLAEADAMITQLIHDNSAAVSKTAQR 400
            PQKAS++T +YD QL EAD +I +LIH+NS A  KTAQR
Sbjct: 359 PPQKASYTTQVYDHQLMEADNLIARLIHENS-ATGKTAQR 397