Pairwise Alignments

Query, 400 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 390 a.a., multidrug efflux system (NCBI) from Escherichia coli BW25113

 Score =  319 bits (818), Expect = 8e-92
 Identities = 168/385 (43%), Positives = 239/385 (62%), Gaps = 2/385 (0%)

Query: 7   SQAPDNAQDTSNLRKRKVMLFALTIVVILAGLGVWGYQEFYGRWNESTDDAYVNGNVVEI 66
           +Q P      S  RKR ++L  L  ++I   +G++ +     R  E TDDAYV GN ++I
Sbjct: 7   TQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVL--RHFEETDDAYVAGNQIQI 64

Query: 67  TPLVTGTVVSIGADDGDLVHEGQVLVNFDPNDAEVGLQSAQANLARTVRQVRGLYSNVDG 126
              V+G+V  + AD+ D V EG VLV  DP DA    + A+  LA +VRQ   L  N   
Sbjct: 65  MSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQ 124

Query: 127 MKAQVNAQQAEVQKAQDNFNRRKNLAAGGAISQEELSHARDDLTSAQNALANAKQQLMTT 186
           ++A +  Q+  + KAQ ++NRR  L     I +EEL HARD +TSAQ  L  A QQ    
Sbjct: 125 LQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNAN 184

Query: 187 SALVDDTVVSSHPDVMSAAAQLRQAYLTHARSTLIAPVTGYVAKRSVQLGQRVQPGTALM 246
            A++  T +   P V  AA ++R A+L   R+ +I+P+TGYV++R+VQ G ++ P T LM
Sbjct: 185 QAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLM 244

Query: 247 AVIPLDQLWIDANFKETQLRDMRIGQPVDIEADLYGSDVKYSGTIDSLGAGTGSAFALLP 306
           AV+P   +W+DANFKETQ+ +MRIGQPV I  D+YG DVKY+G +  L  GTGSAF+LLP
Sbjct: 245 AVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLP 304

Query: 307 AQNATGNWIKIVQRVPVRIHINAEELARHPLRVGLSTQVDVNLRDQSGPVLAQQSPQKAS 366
           AQNATGNWIK+VQR+PVRI ++ ++L ++PLR+GLST V VN  ++ G VLA +      
Sbjct: 305 AQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPV 364

Query: 367 FSTSIYDRQLAEADAMITQLIHDNS 391
             ++  +  LA  + +I  ++  N+
Sbjct: 365 AVSTAREISLAPVNKLIDDIVKANA 389