Pairwise Alignments

Query, 436 a.a., Hexuronate transporter from Pseudomonas fluorescens FW300-N1B4

Subject, 454 a.a., D-galacturonate transporter (MFS superfamily) (from data) from Pseudomonas simiae WCS417

 Score =  401 bits (1031), Expect = e-116
 Identities = 189/431 (43%), Positives = 283/431 (65%), Gaps = 9/431 (2%)

Query: 15  PSRKRFFIMVLLFITVVINYLDRSNLSIAAPALTSDLGIDPIHVGLIFSAFGWTYAAMQI 74
           P+  R+ I+++LF+   INY DR+ ++IA  +L  DLGID + +G IFSAFGW Y A QI
Sbjct: 6   PTHVRYLILLMLFLVTTINYADRATIAIAGSSLQKDLGIDAVTLGYIFSAFGWAYVAGQI 65

Query: 75  PGGWLVDRVPPRILYSVALLLWSLATVMLGFAASF------IALFVLRMAVGALEAPAYP 128
           PGGWL+DR   + +Y++++  WSL TV+ G+   F      +ALF+LR  VG  EAP++P
Sbjct: 66  PGGWLLDRFGSKKVYALSIFTWSLFTVLQGYVGEFGVSTAVVALFMLRFMVGLAEAPSFP 125

Query: 129 INSRVVTTWFPERERATAIGFYTSGQFVGLAFLTPVLAWLQHQYGWHMVFVSTGAVGIIW 188
            N+R+V  WFP  ER TA   + S Q+       P++ W+ + +GW  VF+  G +GII+
Sbjct: 126 GNARIVAAWFPTAERGTASAIFNSAQYFATVLFAPLMGWIVYSFGWQHVFIVMGVIGIIF 185

Query: 189 AVIWYAVYREPRDFKGANDAEIELIREGGGLVDIQAEAAKTKAKFS--WIDLGIVLSKRK 246
           ++IW  V   PR     N+AE   I   G +VD+  +  K K      W  +  +L+ R 
Sbjct: 186 SLIWLKVIHSPRQHPMINEAEFNHIAANGAMVDMDQDKGKGKKTDGPKWDYIRQLLTNRM 245

Query: 247 LWGIYLGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCSGFFSD 306
           + G+YLGQ+C+N   +FFLTWFP YLV+ RGM  +K+G +ASLP +  F+G +  G  SD
Sbjct: 246 MLGVYLGQYCINGITYFFLTWFPVYLVQDRGMTILKAGFIASLPAICGFIGGVLGGVISD 305

Query: 307 FLIRRGYTVGFARKLPIIGGLLISTSIIGANFVESTPLVIAFLALAFFGNGLASITWSLV 366
           +L+R+G+++ FARK PIIGGLLIS+SI+  N+V+   +V+ F+ALAFFG G+ ++ W++V
Sbjct: 306 YLLRKGHSLTFARKAPIIGGLLISSSIVACNYVDIEWMVVGFMALAFFGKGVGALGWAVV 365

Query: 367 STLAPARLLGLTGGVFNFIGNLAAITTPIVIGFLAS-GDSFAPAITYISVLALLGALSYV 425
           S  +P ++ GL+GG+FN  GNLA+ITTPIVIG++ S   SF  A+ ++   AL+   SY+
Sbjct: 366 SDTSPKQIAGLSGGLFNTFGNLASITTPIVIGYIISTTGSFKWALVFVGANALVAVFSYL 425

Query: 426 LLVGKVERIKL 436
           ++VG ++R+ L
Sbjct: 426 VIVGPIKRVVL 436