Pairwise Alignments

Query, 436 a.a., Hexuronate transporter from Pseudomonas fluorescens FW300-N1B4

Subject, 444 a.a., predicted (D)-galactarate transporter (NCBI) from Escherichia coli BW25113

 Score =  365 bits (938), Expect = e-105
 Identities = 175/429 (40%), Positives = 267/429 (62%), Gaps = 13/429 (3%)

Query: 19  RFFIMVLLFITVVINYLDRSNLSIAAPALTSDLGIDPIHVGLIFSAFGWTYAAMQIPGGW 78
           R+ I++++FI   +NY DR+ LSIA   +  +L +  + +G IFSAFGW Y  MQIPGGW
Sbjct: 16  RYLILLIIFIVTAVNYADRATLSIAGTEVAKELQLSAVSMGYIFSAFGWAYLLMQIPGGW 75

Query: 79  LVDRVPPRILYSVALLLWSLATVMLGFAASF------IALFVLRMAVGALEAPAYPINSR 132
           L+D+   + +Y+ +L  WSL T + GF   F      I++F +R  +G  EAP++P N+R
Sbjct: 76  LLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGISMFFMRFMLGFSEAPSFPANAR 135

Query: 133 VVTTWFPERERATAIGFYTSGQFVGLAFLTPVLAWLQHQYGWHMVFVSTGAVGIIWAVIW 192
           +V  WFP +ER TA   + S Q+  LA  +P+L WL   +GW  VF   G +G +   +W
Sbjct: 136 IVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLTFAWGWEHVFTVMGVIGFVLTALW 195

Query: 193 YAVYREPRDFKGANDAEIELIREGGGLVDIQ----AEAAKTKAKFSWIDLGIVLSKRKLW 248
             +   P D    +  E++ I E G +VD+       AA +  K  +I    +LS R + 
Sbjct: 196 IKLIHNPTDHPRMSAEELKFISENGAVVDMDHKKPGSAAASGPKLHYIKQ--LLSNRMML 253

Query: 249 GIYLGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCSGFFSDFL 308
           G++ GQ+ +N+  WFFLTWFP YLV+ +GM  +K GL+AS+P L  F G +  G FSD+L
Sbjct: 254 GVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKVGLVASIPALCGFAGGVLGGVFSDYL 313

Query: 309 IRRGYTVGFARKLPIIGGLLISTSIIGANFVESTPLVIAFLALAFFGNGLASITWSLVST 368
           I+RG ++  ARKLPI+ G+L++++II  N+  +T LV+  +ALAFFG G  ++ W ++S 
Sbjct: 314 IKRGLSLTLARKLPIVLGMLLASTIILCNYTNNTTLVVMLMALAFFGKGFGALGWPVISD 373

Query: 369 LAPARLLGLTGGVFNFIGNLAAITTPIVIGFLASG-DSFAPAITYISVLALLGALSYVLL 427
            AP  ++GL GGVFN  GN+A+I TP+VIG+L S   SF  A+ ++   AL+  + Y+ +
Sbjct: 374 TAPKEIVGLCGGVFNVFGNVASIVTPLVIGYLVSELHSFNAALVFVGCSALMAMVCYLFV 433

Query: 428 VGKVERIKL 436
           VG ++R++L
Sbjct: 434 VGDIKRMEL 442