Pairwise Alignments

Query, 436 a.a., Hexuronate transporter from Pseudomonas fluorescens FW300-N1B4

Subject, 450 a.a., predicted D-glucarate transporter (NCBI) from Escherichia coli BW25113

 Score =  384 bits (986), Expect = e-111
 Identities = 180/436 (41%), Positives = 276/436 (63%), Gaps = 9/436 (2%)

Query: 10  ASLVTPSRKRFFIMVLLFITVVINYLDRSNLSIAAPALTSDLGIDPIHVGLIFSAFGWTY 69
           +S+   +  R++I+V+LFI    NY DR+ LSIA   +  D+G+DP+ +G +FSAF W Y
Sbjct: 9   SSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAY 68

Query: 70  AAMQIPGGWLVDRVPPRILYSVALLLWSLATVMLGFAASF------IALFVLRMAVGALE 123
              QIPGGWL+DR   + +Y  ++ +WS+ T++ GF   F      +ALF LR  VG  E
Sbjct: 69  VIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAE 128

Query: 124 APAYPINSRVVTTWFPERERATAIGFYTSGQFVGLAFLTPVLAWLQHQYGWHMVFVSTGA 183
           AP++P NSR+V  WFP +ER TA+  + S Q+       P++ WL H+ GW  VF   G 
Sbjct: 129 APSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGG 188

Query: 184 VGIIWAVIWYAVYREPRDFKGANDAEIELIREGGGLVDIQAEAAKTKAKFS--WIDLGIV 241
           +GI+ + IW  V  EP    G N  E+E I  GG L+++  +  K K  FS  W  +  +
Sbjct: 189 LGIVISFIWLKVIHEPNQHPGVNKKELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQL 248

Query: 242 LSKRKLWGIYLGQFCLNSTLWFFLTWFPTYLVKYRGMDFIKSGLLASLPFLAAFVGVLCS 301
           L  R + G+Y+GQ+C+N+  +FF+TWFP YLV+ RGM  +K+G +AS+P +  F+G +  
Sbjct: 249 LGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLG 308

Query: 302 GFFSDFLIRRGYTVGFARKLPIIGGLLISTSIIGANFVESTPLVIAFLALAFFGNGLASI 361
           G  SD+L+RR  ++  ARK PI+ G+L+S  ++  N+V    ++I F+ALAFFG G+ ++
Sbjct: 309 GIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGAL 368

Query: 362 TWSLVSTLAPARLLGLTGGVFNFIGNLAAITTPIVIGFL-ASGDSFAPAITYISVLALLG 420
            W++++  AP  + GL+GG+FN  GN++ I TPI IG++  +  SF  A+ Y+ V AL+ 
Sbjct: 369 GWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIA 428

Query: 421 ALSYVLLVGKVERIKL 436
            LSY++LVG ++RI+L
Sbjct: 429 VLSYLVLVGDIKRIEL 444