Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 301 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score =  200 bits (509), Expect = 3e-56
 Identities = 117/296 (39%), Positives = 169/296 (57%), Gaps = 4/296 (1%)

Query: 2   LNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTYGIELFRRVGRQLELTEA 61
           +NY  L+YFW V K GS+V A E L LTPQTI+GQI  LE+    +LF+R GR LE +E 
Sbjct: 6   INYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEPSEL 65

Query: 62  GRQTLPYAEQMFQLGGELELMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTMELSEPL 121
           G     YA++MF L  E+ L +     E  +LF VGVAD + K +V  ++   +   EP+
Sbjct: 66  GELVYRYADKMFTLSQEM-LDIVNYRKESNLLFDVGVADALSKRLVSSVLNAAVVEGEPI 124

Query: 122 RITCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGECGISFFATAELAARY 181
            + C E   E LL  L+  +LD++ISD P+ S      +S ++GECG+SF+ T     + 
Sbjct: 125 HLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEK- 183

Query: 182 GQDFPRSLHGAPLLIPGPETVVRSRLQRWFAEQQIQPQIVGEFDDSALMQAFGQSGSGIF 241
              FP  L    LLIPG  +++  +L  WF  Q +  +I+GEFDD+ALM+AFG   + IF
Sbjct: 184 --PFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIF 241

Query: 242 IGPSVIADEVKRQCGVELIGQTDAVSESFYAISVERKIKHPGIVAITEGARRELFT 297
           + P++ A +      V  IG+ + V E ++AI  ER I+HP +  I       LF+
Sbjct: 242 VAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFS 297