Pairwise Alignments

Query, 394 a.a., Lipoprotein releasing system transmembrane protein LolC from Pseudomonas fluorescens FW300-N1B4

Subject, 414 a.a., outer membrane-specific lipoprotein transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  270 bits (691), Expect = 4e-77
 Identities = 151/392 (38%), Positives = 235/392 (59%), Gaps = 4/392 (1%)

Query: 1   VSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHATIES-GEPISDWQSLA 59
           VS IS+ S IG+ALGV V+IV LS MNGF+ E+  R+L +VPH  IE+  +P ++WQ   
Sbjct: 23  VSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEAL 82

Query: 60  AKVKQNPQVAAVAPFVQMQGLLTNNGKVSKVLLNAIDPVQERQVSIIDNFMQQGKLDDLA 119
             V++ P +AA AP++   GL+ +   +  + +  ++P QE+++S + +F+Q     +  
Sbjct: 83  DHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFK 142

Query: 120 PGSFGIVIGDKAAAKLGVAVGDKLTFVAPEVTVTPAGMFPRMKRFTVVGIFHVGAGEIDG 179
            G   I+IG   A  L V  GD ++ + P        M P+  R  V GI  + +G++D 
Sbjct: 143 AGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQL-SGQLDH 201

Query: 180 YLGITNLQDLAKLHRWQPDQVQGLRLKFDDLFQAPRMAWTIAQQLGEDTYYARDWTRTHG 239
              +  L D A+ +      V G+ LK  D+F A ++    A ++     Y + W  T+G
Sbjct: 202 SFAMIPLAD-AQQYLDMGSSVSGIALKMTDVFNANKLVRD-AGEVTNSYVYIKSWIGTYG 259

Query: 240 NLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGSTPGQIMAIF 299
            +Y+ I+M +A++ L ++L++ VA FNI+STLVM V DK GDIA+LRTLG+  G I AIF
Sbjct: 260 YMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIF 319

Query: 300 MVQGTVIGVVGTLIGAVVGIFAALNVSAAISALEGLIGHKFLNADVYFIDYLPSQVQSQD 359
           +  G + G+ G+L G ++G+  +L ++  I  +E LIGH+FL++D+YFID+LPS++   D
Sbjct: 320 VWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLD 379

Query: 360 VLMVCAAALVLSFLATLYPAWRAARTQPAEAL 391
           V  V   AL+LS LA+ YPA RA+   PA  L
Sbjct: 380 VFYVLVTALLLSLLASWYPARRASNIDPARVL 411