Pairwise Alignments

Query, 856 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N1B4

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  352 bits (902), Expect = e-101
 Identities = 205/557 (36%), Positives = 320/557 (57%), Gaps = 12/557 (2%)

Query: 300 QALEASEERFRAVAEAASDWIWETDDQHCITYLSGRFSTVTGFSDQQWLGQNIGQLLNCE 359
           Q LE SE+RFR++     + ++  D    I  ++     +   +    +G +   L+  E
Sbjct: 178 QRLEESEQRFRSLFTYNPNPVFALDRAGNIQSVNPAGLKLKAGAATDLVGHHFSHLVFEE 237

Query: 360 TMPL---SLWLNKLDEEQAVSHLRCSYRDQSG-QQRVCRVSARPIQRKGALLGFRGTASD 415
            +P      +  +  E Q         RD+S  +Q +  ++  PI   G ++G  G A D
Sbjct: 238 DLPKVNQHFFAARAGEPQ---RFEARVRDESDDKQLIMDIANLPIMVNGEIVGVFGIARD 294

Query: 416 ITDEVAAHAQIQHLSMHDALTGLPNRNKLA-RYLEDALALKEQSTALTLLMIDLDNFKPI 474
           I+ +     Q+   + HD LTGL NR  L  R ++   + +++   L ++ IDLD FK I
Sbjct: 295 ISKQKHYERQLSINASHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYIDLDGFKSI 354

Query: 475 NDSLGHPAGDAVLLEVAIRLRECTRDIDLVARLGGDEFVLVLHGMDSHAEIDRFCERLLD 534
           NDS+GH  GD VL+EVA RL +  R  D V R+GGDEFV++L  +    +     ERLL 
Sbjct: 355 NDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAVPVAERLLA 414

Query: 535 SLHQPIHYDHHTLHIGASIGIALSRRQGHLPEELIRCADIALYQAKSNGKKTWCYFAAHM 594
           S+ +P       LH+  SIGI +S      P +LI+ AD+A+Y+AK  G+  + ++ + +
Sbjct: 415 SIGKPYCIQGIDLHVSTSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRNNFQWYTSDL 474

Query: 595 NDQIQHRRQLESDLRQAIKNNEFVMHYQPRYHVDGKQIVSVEALLRWQHPVQGLLNPDAF 654
           N ++   R L +DL++AIK   F +HYQP+     +++V +EALLRW+HPV+G ++P  F
Sbjct: 475 NHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVF 534

Query: 655 IPLAEQTDLIVPLGRWVLREAC----ETALTWPGAMMVSVNLSPVQFARSDVIEDVREAL 710
           IP+AE +  I+PL  WVL  AC    +        + ++VN+SP+ F     +E ++  L
Sbjct: 535 IPVAEDSGQIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFVECIQAVL 594

Query: 711 IQSRLPASRLELEITENVMLIDVDGALATMNALKELGVRLNMDDFGTGYSSLGYLRTYPF 770
            +  L A +LELEITE+++L +V+ A+AT++ LK+LGVR+ +DDFGTG+SSL YL+  P 
Sbjct: 595 SKHGLSAGQLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCLPI 654

Query: 771 DGIKIDKRFIASMSNGSNDRAVVQAIINLGKAMGLTVTAEGVETLEQLDFLISDQCHEVQ 830
           D IKID+ FI  +S   +D A+ Q II++   + L+V AEGVET  Q++FL   +C  +Q
Sbjct: 655 DKIKIDRSFIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQ 714

Query: 831 GFYLSRPVDRHALLPLL 847
           G+Y +RP+   AL   L
Sbjct: 715 GYYFARPMSHEALRTFL 731