Pairwise Alignments

Query, 856 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N1B4

Subject, 861 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  947 bits (2448), Expect = 0.0
 Identities = 491/843 (58%), Positives = 615/843 (72%), Gaps = 5/843 (0%)

Query: 10  APARHTPI--TRNLIFVIGLLFVVGVLIALIALFSIAGRLDAQDLSKTTFYTQRALENRI 67
           +PA  TP    R+LI     +F +  L+ L ALF+IA  LD Q+  ++ F+  +ALE R+
Sbjct: 8   SPASPTPRFQVRHLIAGFSAVFGLACLVILGALFNIARTLDQQERERSAFHATQALEQRL 67

Query: 68  TASKNYIVSYANWTTAYDHLNDKVDVQWAYVEQNVGKTLFTIDHYDAVFVIDGQRTKYAT 127
            AS+ ++ SYA W  A++HL+ + D QWAY E+NVG++L++   Y+ VFV++ +RT YA 
Sbjct: 68  LASRQFLSSYAVWDAAFEHLSGQADWQWAYEEKNVGESLYSASGYEGVFVVENRRTTYAL 127

Query: 128 VRGLLVQDQATAYLSTSMATLVDEVQSQESLIEPVSRYTLFEGKPALLTAAAIVPNDERP 187
            +G   Q  A +Y+ T +  ++++ ++     E V+R+ LF G PA L+AAA+ P+ E  
Sbjct: 128 FKGQPSQAGADSYIDTPLQPIIEQARAAAISREQVTRFVLFNGWPAALSAAAVRPDREVT 187

Query: 188 AVDPKSTSVLIYVDQLNPEKLATLSADYGLHDLSLTADDVIVPGQPAVALTGTGYSLVSR 247
             +     V++++DQL   KLA L    GL  + +  +D        + L  TGY L   
Sbjct: 188 DSEVSQAPVMLFIDQLTESKLAQLGKGAGLTGMHVEKEDRQDHNHLRIDLGDTGYHLTWN 247

Query: 248 LEQPGHQLLWSLLPPLGGALLILALLTAYFFRYVLRTSGHVDASYTSLDLSNQALEASEE 307
              PG Q+LW++LP L  ALLIL L+  Y FR+ LR+S  +  +   L  SNQALEASE+
Sbjct: 248 SPLPGQQMLWAVLPALLCALLILGLVMLYLFRHALRSSRAIGLTLVHLQQSNQALEASEQ 307

Query: 308 RFRAVAEAASDWIWETDDQHCITYLSGRFSTVTGFSDQQWLGQNIGQLLNCETMPLSLWL 367
           RFRAVAE+ASDWIWETD Q  +TYLS RF+ VTG+    WLG  + QLL C+T PLS WL
Sbjct: 308 RFRAVAESASDWIWETDRQQRLTYLSQRFANVTGYPVDGWLGHPLNQLLACDTTPLSPWL 367

Query: 368 NKLD--EEQAVSHLRCSYRDQSGQQRVCRVSARPIQRKGALLGFRGTASDITDEVAAHAQ 425
           + L   E Q +++LRC+YRDQ+GQ R CR+SAR I R G  +GFRGTASDITDEV AHA+
Sbjct: 368 DALTAAEPQQLANLRCTYRDQNGQNRYCRISARAIWRDGKAIGFRGTASDITDEVDAHAR 427

Query: 426 IQHLSMHDALTGLPNRNKLARYLEDALALKEQSTALTLLMIDLDNFKPINDSLGHPAGDA 485
           IQHLS+HD LTGL NRNKLAR+LE AL     S  LTLL++DLDNFKPINDSLGH AGDA
Sbjct: 428 IQHLSLHDPLTGLANRNKLARHLEQALLRGSDSPPLTLLLLDLDNFKPINDSLGHAAGDA 487

Query: 486 VLLEVAIRLRECTRDIDLVARLGGDEFVLVLHGMDSHAEIDRFCERLLDSLHQPIHYDHH 545
           VL EVA RLR+ TRD DLVARLGGDEF+LVL GMD+ +EIDRFC RL+  L QPI +++ 
Sbjct: 488 VLQEVATRLRDTTRDGDLVARLGGDEFILVLSGMDNSSEIDRFCARLIGLLQQPIVFENQ 547

Query: 546 TLHIGASIGIALSRRQGHLPEELIRCADIALYQAKSNGKKTWCYFAAHMNDQIQHRRQLE 605
            LHIGASIG+A +R QG    ELIRCADIALYQAK++GK TW YF A MN QIQ+RRQLE
Sbjct: 548 PLHIGASIGVAQTRNQGFDAGELIRCADIALYQAKADGKNTWRYFVAEMNQQIQYRRQLE 607

Query: 606 SDLRQAIKNNEFVMHYQPRYHVDGKQIVSVEALLRWQHPVQGLLNPDAFIPLAEQTDLIV 665
           +DLR+A++N EF +HYQPRY +D  +IV+VEAL+RW+HP +GLL PD FIPLAEQ+D+IV
Sbjct: 608 NDLRRALRNEEFELHYQPRYRLDDLRIVAVEALVRWRHPQEGLLAPDTFIPLAEQSDIIV 667

Query: 666 PLGRWVLREACETALTWPGAMMVSVNLSPVQFARSDVIEDVREALIQSRLPASRLELEIT 725
            LGRWVLREAC TA  WP  ++VSVNLSP QF RSDV+ DVRE L+ +  PA RLELEIT
Sbjct: 668 ALGRWVLREACRTAHDWPADVLVSVNLSPAQFLRSDVVADVRETLLDTAFPAQRLELEIT 727

Query: 726 ENVMLIDVDGALATMNALKELGVRLNMDDFGTGYSSLGYLRTYPFDGIKIDKRFIASM-S 784
           ENVML D++GAL TM +LKELGVRLNMDDFGTGYSSLGYLRTYPFD IKIDKRFI+ + +
Sbjct: 728 ENVMLNDIEGALGTMLSLKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFISGLNN 787

Query: 785 NGSNDRAVVQAIINLGKAMGLTVTAEGVETLEQLDFLISDQCHEVQGFYLSRPVDRHALL 844
           NG +DRAVVQAIINLG+AMGLTVTAEGVE+  QL  L  D+CHEVQG+YLS+P+D   L 
Sbjct: 788 NGGSDRAVVQAIINLGEAMGLTVTAEGVESEHQLKSLEKDRCHEVQGYYLSKPLDSAGLT 847

Query: 845 PLL 847
            LL
Sbjct: 848 ALL 850