Pairwise Alignments

Query, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 315 a.a., cytochrome Cbb3 from Pseudomonas simiae WCS417

 Score =  468 bits (1205), Expect = e-137
 Identities = 217/327 (66%), Positives = 257/327 (78%), Gaps = 14/327 (4%)

Query: 1   MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRSESTDETVGHSFDGIEEYDNPLPKWWFM 60
           MT FWS ++ VL+LG++  LTWLL+ TRKG+   S D+T+GH+FDGIEEYDNPLP+WWFM
Sbjct: 1   MTLFWSTWICVLTLGSLIGLTWLLVGTRKGETKGSVDQTMGHAFDGIEEYDNPLPQWWFM 60

Query: 61  LFVGTIIFALGYLVLYPGLGNWKGLLPGYNYLDNEKQTAFANGQTGWTGVHEWEKEMLRS 120
           LF GT++FA+GYL+LYPGLGNWKG+LPGY              Q GWT   EW+KEM+++
Sbjct: 61  LFAGTLVFAVGYLILYPGLGNWKGVLPGY--------------QDGWTQTKEWDKEMVKA 106

Query: 121 DAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWR 180
           DAKFGPIFAKF++MP+EEVAKDPQALKMGGRLFASNC+VCHGSDAKGA+GFPNL D  WR
Sbjct: 107 DAKFGPIFAKFSAMPVEEVAKDPQALKMGGRLFASNCAVCHGSDAKGAFGFPNLADNIWR 166

Query: 181 WGGDAQTIKTTIMGGRHAVMPAWAAVIGEQGVSDVAAYVLTNLDGRKLPEGAKADPVAGQ 240
           WGG A+ IKTTI+ GRHA MPAW  ++G++GV +VAAYV  ++    LP  + AD  AGQ
Sbjct: 167 WGGSAEAIKTTILNGRHAAMPAWGDMLGDEGVKNVAAYVRHDVAKLPLPADSTADLAAGQ 226

Query: 241 KLFAANCVACHGPAGKGTPAMGAPDLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQ 300
             F   CVACHGP G G  AMGAPDLT PA +IYG+S AQLQQTIR+GRQGQMPAQE LQ
Sbjct: 227 TAFNTTCVACHGPEGHGMEAMGAPDLTKPAGYIYGTSLAQLQQTIRHGRQGQMPAQEVLQ 286

Query: 301 GNDKVHLLAAYVYSLSHGEKAPEADAQ 327
           GNDKVHLLAAYVYSLSH       ++Q
Sbjct: 287 GNDKVHLLAAYVYSLSHNADGATPESQ 313