Pairwise Alignments

Query, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

 Score =  234 bits (598), Expect = 2e-66
 Identities = 131/323 (40%), Positives = 192/323 (59%), Gaps = 27/323 (8%)

Query: 1   MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRSESTDETVGHSFDG-IEEYDNPLPKWWF 59
           ++ FWS YV V+SL +I     LL  T + + + S D T GH +DG + E +NPLP WW 
Sbjct: 5   ISRFWSNYVAVISLLSILGCVILLWLTARKRVAPSADNTTGHVWDGDLREANNPLPMWWV 64

Query: 60  MLFVGTIIFALGYLVLYPGLGNWKGLLPGYNYLDNEKQTAFANGQTGWTGVHEWEKEMLR 119
            LFV TI+F LGYL ++PGLG+++G                   Q+ WT   E+E E+ +
Sbjct: 65  GLFVLTIVFGLGYLAVFPGLGSFRG-------------------QSDWTSRGEYEAEVAK 105

Query: 120 SDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADW 179
           +  +  P++AK+ +MP+EE+A+DPQA  +G RLF  NC+ CHGSDA+G+ GFP+LTD DW
Sbjct: 106 ATQELAPVYAKYTAMPVEEIARDPQAHAIGERLFMGNCAQCHGSDARGSKGFPDLTDKDW 165

Query: 180 RWGGDAQTIKTTIMGGRHAVMPAWAAVIG-EQGVSDVAAYVLTNLDGRKLPEGAKADPVA 238
            +GG  + I  +I  GR  VMP  AA +G    V +VA YVL +L G    +  +A    
Sbjct: 166 LYGGTPERITESITKGRVGVMPPMAAAVGTSDDVKNVANYVL-SLSGEP-HDSVRAG--L 221

Query: 239 GQKLFAANCVACHGPAGKGTPAMGAPDLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQ 298
           G+  F   CVACHG  G G   +GAP+L+    +++G   A + Q I  G++ +MPAQE+
Sbjct: 222 GKSKFTV-CVACHGVGGVGNQTLGAPNLS-DKIWLHGYGEAAIIQMINSGKRNEMPAQER 279

Query: 299 LQGNDKVHLLAAYVYSLSHGEKA 321
                ++ ++A+YV+ LS+   A
Sbjct: 280 RLTEAQIRMVASYVWGLSNSTAA 302