Pairwise Alignments

Query, 302 a.a., Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p from Pseudomonas fluorescens FW300-N1B4

Subject, 310 a.a., putative adenine-specific methylase (VIMSS) from Escherichia coli BW25113

 Score =  340 bits (872), Expect = 2e-98
 Identities = 165/298 (55%), Positives = 211/298 (70%), Gaps = 3/298 (1%)

Query: 4   SRLRTLRDHIRWAVSRFHGEDLFFGHGTDNAWDEARQLVLGALHLPWEIADSYLDCNLEE 63
           + L+T++D +RW+VSRF   ++++GHGTDN WDEA QLVL +L+LP +I +      L  
Sbjct: 11  NELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIPEDMRTARLTS 70

Query: 64  DELVNLQRLLKRRIEERIPTAYLLGEAWFCGMSFIVDERVLIPRSPIGELIEKRFEPWLG 123
            E   +   + RR+ ERIP AYL  +AWFCG  F VDERVL+PRSPIGELI  +F   + 
Sbjct: 71  SEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINNKFAGLIS 130

Query: 124 AEPARILDLCTGSGCIGIACAYEFQNAEVVLADLSFEALEVANQNIERHGVDERVFTVQG 183
            +P  ILD+CTGSGCI IACAY F +AEV   D+S +AL VA QNIE HG+   V  ++ 
Sbjct: 131 KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRS 190

Query: 184 DGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQHEPELGLACGDDGLNLVRRMLAEAAD 243
           D F  LP  ++DLIV+NPPYVDAED +D+P+EY+HEPELGLA G DGL L RR+L  AAD
Sbjct: 191 DLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAAD 250

Query: 244 HLTEKGLLIVEVGNSQVHVEALYPEVDFAWLEFERGGHGVFMLTAEQ---CRDHQALF 298
           +L + G+LI EVGNS VH+   YP+V F WLEF+ GG GVFMLT EQ    R+H A++
Sbjct: 251 YLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLIAAREHFAIY 308