Pairwise Alignments

Query, 297 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

Subject, 501 a.a., OmpA-like porin from Agrobacterium fabrum C58

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 22/190 (11%)

Query: 66  IPIGDERPKTVTPAKPLVKDSEQIDAGIAQAANDPLKSIADDISAAFGDLISSNQMTVRG 125
           IP   E PKTV P +P     E++ A +    +  L ++AD                V G
Sbjct: 315 IPRVVEPPKTVAPRQP--SRLEKLMAFLQPEVDKKLVTLAD----------------VNG 356

Query: 126 NELWVEIELNSSLLFGSGDAMPSDIAFNIIDKVAAILRPFDNPIHVEGFTDDQPIRTAQY 185
               + + +N+S LF +G A  S    ++I ++   L        V G+TD  PI+T ++
Sbjct: 357 R---LRVRINNSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVIGYTDTVPIKTVEF 413

Query: 186 PTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRVVLVVSR 245
           P+NW LS AR+ ++  +L+ Q   P  + + G  +  P+A+N T EGR  NRR  ++V  
Sbjct: 414 PSNWHLSEARAKAVGDILS-QFTGPDAILTEGRADSDPIADNKTEEGRQINRRTEIMVLT 472

Query: 246 NLDVRRSLTG 255
           N D + S  G
Sbjct: 473 NPDEKLSDAG 482