Pairwise Alignments

Query, 269 a.a., Flagellar assembly protein FliH from Pseudomonas fluorescens FW300-N1B4

Subject, 254 a.a., flagellar assembly protein FliH from Pseudomonas simiae WCS417

 Score =  403 bits (1036), Expect = e-117
 Identities = 200/253 (79%), Positives = 226/253 (89%), Gaps = 1/253 (0%)

Query: 3   SKHDESNTDLIRAKDVGGFDIWSLPSFDPFVPEPEPEPEPEPP-EMEEVPLEEVQPLTLE 61
           S  DE+ +DLIRA+DVGGFDIWSLPSFDP VPEPEPEP  EPP EMEEVPL+EVQPLTLE
Sbjct: 2   SNKDEAPSDLIRARDVGGFDIWSLPSFDPHVPEPEPEPVEEPPAEMEEVPLDEVQPLTLE 61

Query: 62  ELESIRQEAYNEGFAVGEKEGFHSTTLKVRQEAEVALTAKIAGLEQLMANLFEPIAEQDT 121
           ELE+IRQEAYNEGFA GEK+GF STTLKVRQEAE AL+AK+A LE+LM  LF+PIAEQD+
Sbjct: 62  ELEAIRQEAYNEGFAAGEKDGFRSTTLKVRQEAEEALSAKLASLERLMGGLFDPIAEQDS 121

Query: 122 QIEKSLVDLVQHITKQVIQRELAIDSTQIEHVMREALKLLPLGVGNVRLYINPQDFEQVK 181
           QIEK++V+LVQHI +QVIQREL +DS+ IE VMREALKLLPLGVGNVRLYINPQDFEQVK
Sbjct: 122 QIEKAMVELVQHIARQVIQRELVLDSSHIESVMREALKLLPLGVGNVRLYINPQDFEQVK 181

Query: 182 ALRERHEETWRIVEDESLLPGGCRVETEHSRIDATIETRVTQVMAKLFDQLHDQALHPAA 241
           ALRERHEETWRIVED SL PGGCRVETEHSRIDAT+ETR++Q+MAKL DQ H+Q L+PA 
Sbjct: 182 ALRERHEETWRIVEDASLQPGGCRVETEHSRIDATVETRISQIMAKLQDQAHEQVLNPAE 241

Query: 242 PDLSLELPIDEKP 254
           PDLS++L   + P
Sbjct: 242 PDLSVDLDAPDAP 254